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sync up with fork #37

Merged
merged 53 commits into from
Feb 14, 2024
Merged

sync up with fork #37

merged 53 commits into from
Feb 14, 2024

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k-dominik
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k-dominik and others added 30 commits October 2, 2018 09:54
Remove sys.path modification from library
g.nodes_iter() -> g.nodes()
g.node[...] -> g.nodes[...]
g.edges_iter() -> g.edges()
g.edge[...] -> g.edges[...]
when `g.remove_edges_from()` is called with a view as an argument,
such as `g.out_edges(n)`, a RuntimeError is raised:

RuntimeError: dictionary changed size during iteration

removal changes the view.

can be worked around by creating a list:

`g.remove_edges_from(list(g.out_edges(n)))`
k-dominik added 23 commits July 9, 2019 16:32
reflect sklearn now requiring a ndarray as feature vector
fix remove_edges_from called with view
py37 doesn't support Pathlib objs in subprocess args on windows
https://bugs.python.org/issue41649
prepare for for next rebuild cycle
indexing with lists got deprecated in numpy
object ids are updated based on the sequence of objectd ids
which is not guaranteed to be the same every time.
for some reason on linux ci (not on any other machines I could test) this
test failed with 1ulp accuracy.
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@k-dominik k-dominik left a comment

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I didn't go through the changes in detail - we did on the fork already. I just made sure nothing super odd would be merged in.

Changes are

  • many formatting changes
  • removed some odd patterns
  • changes for networkx 2 upgrade
  • added ci
  • fixed pickling issues on win
  • sklearn related updates
  • h5py deprecations
  • reproducible merger resolvers (seeded gmm init)

@k-dominik k-dominik merged commit 100546e into ilastik:main Feb 14, 2024
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2 participants