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[query] Log FASTA downloads (#12217)
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tpoterba authored Sep 23, 2022
1 parent 767bdd6 commit af6ba20
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1 change: 1 addition & 0 deletions hail/src/main/scala/is/hail/io/reference/FASTAReader.scala
Original file line number Diff line number Diff line change
Expand Up @@ -38,6 +38,7 @@ object FASTAReader {

def setup(tmpdir: String, fs: FS, fastaFile: String, indexFile: String): String = {
val localFastaFile = ExecuteContext.createTmpPathNoCleanup(tmpdir, "fasta-reader", "fasta")
log.info(s"copying FASTA file at $fastaFile to $localFastaFile")
fs.copyRecode(fastaFile, localFastaFile)

val localIndexFile = localFastaFile + ".fai"
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