Update gh-pages to output generated at 0b19c3d

haddocking · Dec 6, 2023 · 18cae0a · 18cae0a
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diff --git a/.doctrees/citing.doctree b/.doctrees/citing.doctree
diff --git a/.doctrees/contributing.doctree b/.doctrees/contributing.doctree
diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle
diff --git a/.doctrees/modules/general_module_params.doctree b/.doctrees/modules/general_module_params.doctree
diff --git a/.doctrees/modules/index.doctree b/.doctrees/modules/index.doctree
diff --git a/CNS.html b/CNS.html
@@ -359,7 +359,7 @@ <h2>Makefile<a class="headerlink" href="#makefile" title="Permalink to this head
     <div class="footer" role="contentinfo">
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             &#169; Copyright 2022, BonvinLab.
-        Last updated on Dec 01, 2023.
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     </div>  

diff --git a/INSTALL.html b/INSTALL.html
@@ -377,7 +377,7 @@ <h2><code class="docutils literal notranslate"><span class="pre">gdock</span></c
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             &#169; Copyright 2022, BonvinLab.
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diff --git a/USAGE.html b/USAGE.html
@@ -265,7 +265,7 @@ <h2>Run HADDOCK3<a class="headerlink" href="#run-haddock3" title="Permalink to t
     <div class="footer" role="contentinfo">
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diff --git a/_modules/haddock/core/exceptions.html b/_modules/haddock/core/exceptions.html
@@ -277,7 +277,7 @@ <h1>Source code for haddock.core.exceptions</h1><div class="highlight"><pre>
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             &#169; Copyright 2022, BonvinLab.
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diff --git a/_modules/haddock/gear/greetings.html b/_modules/haddock/gear/greetings.html
@@ -292,7 +292,7 @@ <h1>Source code for haddock.gear.greetings</h1><div class="highlight"><pre>
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diff --git a/_modules/haddock/gear/zerofill.html b/_modules/haddock/gear/zerofill.html
@@ -357,7 +357,7 @@ <h1>Source code for haddock.gear.zerofill</h1><div class="highlight"><pre>
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diff --git a/_modules/haddock/libs/libfunc.html b/_modules/haddock/libs/libfunc.html
@@ -307,7 +307,7 @@ <h1>Source code for haddock.libs.libfunc</h1><div class="highlight"><pre>
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diff --git a/_modules/haddock/libs/libmath.html b/_modules/haddock/libs/libmath.html
@@ -249,7 +249,7 @@ <h1>Source code for haddock.libs.libmath</h1><div class="highlight"><pre>
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diff --git a/_modules/haddock/libs/libmpi.html b/_modules/haddock/libs/libmpi.html
@@ -269,7 +269,7 @@ <h1>Source code for haddock.libs.libmpi</h1><div class="highlight"><pre>
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diff --git a/_modules/haddock/libs/libstructure.html b/_modules/haddock/libs/libstructure.html
@@ -266,7 +266,7 @@ <h1>Source code for haddock.libs.libstructure</h1><div class="highlight"><pre>
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diff --git a/_modules/index.html b/_modules/index.html
@@ -227,7 +227,7 @@ <h1>All modules for which code is available</h1>
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diff --git a/_sources/modules/general_module_params.rst.txt b/_sources/modules/general_module_params.rst.txt
@@ -43,7 +43,7 @@ concat
 | *type*: integer
 | *title*: Number of models to produce per job.
 | *short description*: Multiple models can be calculated within one job
-| *long description*: The defins the number of models that will be generated within on job script. This allows to concatenate the generation of models into one script. In that way jobs might run longer in the batch system and reduce the load on the scheduler.
+| *long description*: This defines the number of models that will be generated within on job script. This allows to concatenate the generation of models into one script. In that way jobs might run longer in the batch system and reduce the load on the scheduler.
 | *group*: execution
 | *explevel*: easy
 

diff --git a/citing.html b/citing.html
@@ -235,7 +235,7 @@ <h1>Citing<a class="headerlink" href="#citing" title="Permalink to this heading"
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diff --git a/clients/clianalyse.html b/clients/clianalyse.html
@@ -231,7 +231,7 @@ <h1>Analysis client<a class="headerlink" href="#analysis-client" title="Permalin
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diff --git a/clients/clibm.html b/clients/clibm.html
@@ -231,7 +231,7 @@ <h1>Benchmark Client<a class="headerlink" href="#benchmark-client" title="Permal
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diff --git a/clients/clicfg.html b/clients/clicfg.html
@@ -231,7 +231,7 @@ <h1>Retrieve config<a class="headerlink" href="#retrieve-config" title="Permalin
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diff --git a/clients/cliclean.html b/clients/cliclean.html
@@ -231,7 +231,7 @@ <h1>Clean HADDOCK3 runs<a class="headerlink" href="#clean-haddock3-runs" title="
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diff --git a/clients/clicp.html b/clients/clicp.html
@@ -231,7 +231,7 @@ <h1>Copy steps to new run<a class="headerlink" href="#copy-steps-to-new-run" tit
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diff --git a/clients/clidmn.html b/clients/clidmn.html
@@ -231,7 +231,7 @@ <h1>Benchmark Daemon<a class="headerlink" href="#benchmark-daemon" title="Permal
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diff --git a/clients/clihd3.html b/clients/clihd3.html
@@ -231,7 +231,7 @@ <h1>Run HADDOCK3<a class="headerlink" href="#run-haddock3" title="Permalink to t
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diff --git a/clients/climpi.html b/clients/climpi.html
@@ -231,7 +231,7 @@ <h1>HADDOCK3 MPI Run<a class="headerlink" href="#haddock3-mpi-run" title="Permal
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diff --git a/clients/clipp.html b/clients/clipp.html
@@ -231,7 +231,7 @@ <h1>PDB preprocessing client<a class="headerlink" href="#pdb-preprocessing-clien
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diff --git a/clients/cliscore.html b/clients/cliscore.html
@@ -231,7 +231,7 @@ <h1>Calculate score<a class="headerlink" href="#calculate-score" title="Permalin
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diff --git a/clients/cliunpack.html b/clients/cliunpack.html
@@ -231,7 +231,7 @@ <h1>Unpack HADDOCK3 run<a class="headerlink" href="#unpack-haddock3-run" title="
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diff --git a/clients/index.html b/clients/index.html
@@ -250,7 +250,7 @@ <h1>Command-line interfaces<a class="headerlink" href="#command-line-interfaces"
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diff --git a/contributing.html b/contributing.html
@@ -552,7 +552,7 @@ <h2>2. Contributing with documentation<a class="headerlink" href="#contributing-
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diff --git a/examples.html b/examples.html
@@ -354,7 +354,7 @@ <h2>docking-multiple-ambig<a class="headerlink" href="#docking-multiple-ambig" t
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diff --git a/genindex.html b/genindex.html
@@ -483,7 +483,7 @@ <h2 id="W">W</h2>
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diff --git a/index.html b/index.html
@@ -256,7 +256,7 @@ <h1>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Pe
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diff --git a/intro.html b/intro.html
@@ -350,7 +350,7 @@ <h1>A brief introduction to HADDOCK3<a class="headerlink" href="#a-brief-introdu
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diff --git a/modules/analysis/caprieval.html b/modules/analysis/caprieval.html
@@ -419,7 +419,7 @@ <h4>sortby<a class="headerlink" href="#sortby" title="Permalink to this heading"
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diff --git a/modules/analysis/clustfcc.html b/modules/analysis/clustfcc.html
@@ -299,7 +299,7 @@ <h4>threshold<a class="headerlink" href="#threshold" title="Permalink to this he
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diff --git a/modules/analysis/clustrmsd.html b/modules/analysis/clustrmsd.html
@@ -290,7 +290,7 @@ <h4>linkage<a class="headerlink" href="#linkage" title="Permalink to this headin
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diff --git a/modules/analysis/index.html b/modules/analysis/index.html
@@ -241,7 +241,7 @@ <h1>Analysis Modules<a class="headerlink" href="#analysis-modules" title="Permal
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diff --git a/modules/analysis/params/alascan.html b/modules/analysis/params/alascan.html
@@ -290,7 +290,7 @@ <h2><a class="reference internal" href="#resdic">resdic</a><a class="headerlink"
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diff --git a/modules/analysis/params/caprieval.html b/modules/analysis/params/caprieval.html
@@ -407,7 +407,7 @@ <h2>sortby<a class="headerlink" href="#sortby" title="Permalink to this heading"
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diff --git a/modules/analysis/params/clustfcc.html b/modules/analysis/params/clustfcc.html
@@ -287,7 +287,7 @@ <h2>threshold<a class="headerlink" href="#threshold" title="Permalink to this he
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diff --git a/modules/analysis/params/clustrmsd.html b/modules/analysis/params/clustrmsd.html
@@ -278,7 +278,7 @@ <h2>linkage<a class="headerlink" href="#linkage" title="Permalink to this headin
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diff --git a/modules/analysis/params/contactmap.html b/modules/analysis/params/contactmap.html
@@ -338,7 +338,7 @@ <h2>topX<a class="headerlink" href="#topx" title="Permalink to this heading">¶<
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diff --git a/modules/analysis/params/rmsdmatrix.html b/modules/analysis/params/rmsdmatrix.html
@@ -251,7 +251,7 @@ <h2><a class="reference internal" href="#resdic">resdic</a><a class="headerlink"
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diff --git a/modules/analysis/params/seletop.html b/modules/analysis/params/seletop.html
@@ -239,7 +239,7 @@ <h2>select<a class="headerlink" href="#select" title="Permalink to this heading"
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diff --git a/modules/analysis/params/seletopclusts.html b/modules/analysis/params/seletopclusts.html
@@ -251,7 +251,7 @@ <h2>top_models<a class="headerlink" href="#top-models" title="Permalink to this
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diff --git a/modules/analysis/rmsdmatrix.html b/modules/analysis/rmsdmatrix.html
@@ -263,7 +263,7 @@ <h4><a class="reference internal" href="#resdic">resdic</a><a class="headerlink"
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diff --git a/modules/analysis/seletop.html b/modules/analysis/seletop.html
@@ -251,7 +251,7 @@ <h4>select<a class="headerlink" href="#select" title="Permalink to this heading"
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