Reversed strand calculation

getzlab · Mar 28, 2019 · 976c249 · 976c249
1 parent 60bcb94
commit 976c249
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/Expression.cpp b/src/Expression.cpp
@@ -119,7 +119,7 @@ namespace rnaseqc {
         if (orientation == Strand::Unknown) return orientation;
         bool target = alignment.ReverseFlag();
         if ((orientation == Strand::Forward) ^ alignment.FirstFlag()) target = !target;
-        return target ? Strand::Forward : Strand::Reverse;
+        return target ? Strand::Reverse : Strand::Forward;
     }
 
     // Legacy version of standard alignment metrics