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Table parse crashes when file (data frame) is empty #414

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vreuter opened this issue Jan 17, 2025 · 0 comments
Open

Table parse crashes when file (data frame) is empty #414

vreuter opened this issue Jan 17, 2025 · 0 comments
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vreuter commented Jan 17, 2025

The aggression of the ImageHandler initialization, in seeking and attempting to parse any and all contents of the analysis subfolder, means that if one of the steps results in an empty table file, e.g. when the ROI merge threshold is set to 0 for no-merge behavior, and then therefore the merge contributors CSV file is empty, the parse attempt will fail with a pandas.errors.EmptyDataError. This should be protected against.

First seen with @josephneos1010 in 6305

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@vreuter vreuter added bug Something isn't working pipeline labels Jan 17, 2025
@vreuter vreuter added this to the v0.12 milestone Jan 17, 2025
@vreuter vreuter self-assigned this Jan 17, 2025
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