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tools_trim_fastq.cwl

Travis CI User edited this page Feb 4, 2020 · 3 revisions

Documentation for trim_fastq.cwl

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Overview

Trim FASTQ (flexbar)

Docker Requirement

mgibio/bisulfite:v1.4

Inputs

Name Label Description Type Secondary Files
adapters File
adapter_trim_end string
adapter_min_overlap int
max_uncalled int
min_readlength int
reads1 File
reads2 File

Outputs

Name Label Description Type Secondary Files
fastq1 File
fastq2 File
fastqs File[]
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