init

Gemfile

@@ -15,6 +15,8 @@ gem "jekyll-remote-theme"
 
 # If you have any plugins, put them here!
 group :jekyll_plugins do
+  gem "jekyll-feed", "~> 0.12"
+  gem "jekyll-liquify"
   gem "jekyll-thumbor", git: "https://github.com/gbif/jekyll-thumbor"
 end
 
@@ -28,3 +30,5 @@ end
 # Performance-booster for watching directories on Windows
 gem "wdm", "~> 0.1.1", :platforms => [:mingw, :x64_mingw, :mswin]
 
+
+gem "webrick", "~> 1.7"

Gemfile.lock

@@ -18,7 +18,7 @@ GEM
       eventmachine (>= 0.12.9)
       http_parser.rb (~> 0.6.0)
     eventmachine (1.2.7)
-    ffi (1.13.1)
+    ffi (1.15.5)
     forwardable-extended (2.6.0)
     http_parser.rb (0.6.0)
     i18n (1.8.5)
@@ -40,6 +40,9 @@ GEM
       terminal-table (~> 1.8)
     jekyll-feed (0.15.0)
       jekyll (>= 3.7, < 5.0)
+    jekyll-liquify (0.0.2)
+      liquid (>= 2.5, < 5.0)
+      redcarpet (~> 3.1)
     jekyll-remote-theme (0.4.2)
       addressable (~> 2.0)
       jekyll (>= 3.5, < 5.0)
@@ -56,7 +59,7 @@ GEM
     kramdown-parser-gfm (1.1.0)
       kramdown (~> 2.0)
     liquid (4.0.3)
-    listen (3.2.1)
+    listen (3.7.1)
       rb-fsevent (~> 0.10, >= 0.10.3)
       rb-inotify (~> 0.9, >= 0.9.10)
     mercenary (0.4.0)
@@ -67,9 +70,10 @@ GEM
     pathutil (0.16.2)
       forwardable-extended (~> 2.6)
     public_suffix (4.0.6)
-    rb-fsevent (0.10.4)
+    rb-fsevent (0.11.2)
     rb-inotify (0.10.1)
       ffi (~> 1.0)
+    redcarpet (3.5.1)
     rexml (3.2.4)
     rouge (3.23.0)
     ruby-thumbor (3.0.0)
@@ -80,19 +84,23 @@ GEM
     terminal-table (1.8.0)
       unicode-display_width (~> 1.1, >= 1.1.1)
     unicode-display_width (1.7.0)
+    webrick (1.7.0)
     yaml (0.1.1)
 
 PLATFORMS
   ruby
 
 DEPENDENCIES
   jekyll (~> 4.1.1)
+  jekyll-feed (~> 0.12)
+  jekyll-liquify
   jekyll-remote-theme
   jekyll-thumbor!
   minima (~> 2.5)
   tzinfo (~> 1.2)
   tzinfo-data
   wdm (~> 0.1.1)
+  webrick (~> 1.7)
 
 BUNDLED WITH
-   2.1.4
+   2.3.18

README.md

@@ -1,10 +1,10 @@
 [![GBIF Hosted Portal](https://docs.gbif.org/style/gbif-hosted-portal.svg)](https://github.com/gbif/hosted-portals)
-[![Build Status](https://builds.gbif.org/job/hp-template/badge/icon)](https://builds.gbif.org/job/hp-template/lastBuild/console)
+[![Build Status](https://builds.gbif.org/job/hp-nhc/badge/icon)](https://builds.gbif.org/job/hp-nhc/lastBuild/console)
 <!-- License badge example: [![CC BY-SA 4.0](https://img.shields.io/badge/License-CC%20BY%2D-SA%204.0-lightgrey.svg)](https://creativecommons.org/licenses/by-sa/4.0/) -->
 
-# GBIF Hosted Portal: hp-template
+# GBIF Hosted Portal: hp-nhc
 
-This Jekyll website, **[hp-template](https://hp-template.gbif.org/)**, makes use of a theme and biodiversity widgets developed by the GBIF network.
+This Jekyll website, **[hp-nhc](https://hp-nhc.gbif.org/)**, makes use of a theme and biodiversity widgets developed by the GBIF network.
 
 You can find information on editing this site and more on [gbif/hosted-portals](https://github.com/gbif/hosted-portals)
 

_config.yml

@@ -19,16 +19,16 @@
 # You can create any custom variable you would like, and they will be accessible
 # in the templates via {{ site.myvariable }}.
 
-title: Template # the title of your site should go here
+title: Natural History Collections # the title of your site should go here
 email: [email protected]
 description: >- # this means to ignore newlines (until baseurl:)
   Write an awesome description for your new site here. You can edit this
   line in _config.yml. It will appear in your document head meta (for
   Google search results) and in your feed.xml site description.
 baseurl: "" # the subpath of your site, e.g. /blog
-url: "https://hp-template.gbif.org/" # the base hostname & protocol for your site, e.g. http://example.com
-twitter_username: yourname # if you have an account you want to link to. Else comment this line out
-github_username:  yourname # if you have an account you want to link to. Else comment this line out
+url: "https://hp-nhc.gbif.org/" # the base hostname & protocol for your site, e.g. http://example.com
+twitter_username: gbif # if you have an account you want to link to. Else comment this line out
+github_username:  gbif # if you have an account you want to link to. Else comment this line out
 
 # Build settings
 theme: minima
@@ -54,21 +54,20 @@ siteMeasurements:
 
 algae:
   rootLang: en
-  # latestPostLimit: 2
-  # logo: /assets/images/fungi.svg  # Logo in navbar, will be displayed with 28px height
-  # logoAndTitle: false           # include the title next to the logo
+  latestPostLimit: 3
+  logo: /assets/images/logo.svg  # Logo in navbar, will be displayed with 28px height
+  logoAndTitle: true             # include the title next to the logo
   archive_permalink: /news/       # Permalink of page using archive.html layout, required when using post categories
   style:
-    # square: false               # Should corners be square or rounded
+    square: true                  # Should corners be square or rounded
     colors:
-      primary: "#fa5e97"          # Primary color of your brand. Use HEX code. Used for buttons and links
-      # links: "#fa5e97"          # What color should links have. Use a HEX code. DEfault is primary color. 
+      primary: "#4D39E9"          # Primary color of your brand. Use HEX code. Used for buttons and links
+      links: "#4D39E9"            # What color should links have. Use a HEX code. DEfault is primary color. 
     coloredHeadlineLinks: false   # If a headline is a link, then use the link color. Default is true. 
   navbar:                         # RELATED TO NAVIGATION BAR
-    # brandBackground: yellow     # Define a custom background for the logo/title in the top navigation bar
-    # color: "tomato"             # What color should the navbar be?
-    # hasWhiteText: true          # Should the text color be white?
-    # floating: true
+    brandBackground: "#4D39E9"    # Define a custom background for the logo/title in the top navigation bar
+    color: "#1B2032"              # What color should the navbar be?
+    hasWhiteText: true            # Should the text color be white?
 
 # Exclude from processing.
 # The following items will not be processed, by default.
@@ -105,8 +104,4 @@ defaults:
       path: "_posts" # an empty string here means all files in the project
     values:
       layout: "post"
-      permalink: "/post/:year/:slug/"   # Use /post/yyyy/{filename}/ as permalink for all posts
-  - scope:
-      path: "da/" # For anything in the "da" folder the default is to set the lang frontMatter property to "da" . this should be deleted or adapted to your site if you support other languages
-    values:
-      lang: da
+      permalink: "/post/:year/:slug/"   # Use /post/yyyy/{filename}/ as permalink for all posts

_config_staging.yml

@@ -1 +1 @@
-url: "https://hp-template.gbif-staging.org/" # the base hostname & protocol for your staging site, e.g. https://hp-example.gbif-staging.org
+url: "https://hp-nhc.gbif-staging.org/" # the base hostname & protocol for your staging site, e.g. https://hp-example.gbif-staging.org

_config_uat.yml

@@ -1 +1 @@
-url: "https://hp-template.gbif-uat.org/" # the base hostname & protocol for your staging site, e.g. https://hp-example.gbif-uat.org
+url: "https://hp-nhc.gbif-uat.org/" # the base hostname & protocol for your staging site, e.g. https://hp-example.gbif-uat.org

_data/about.yml

@@ -0,0 +1,8 @@
+about:
+- content:
+  - title: Intro
+    path: /introduction
+  - title: How to edit
+    path: /access
+  - title: Frequently asked questions
+    path: /faq

_data/footer.yml

@@ -13,7 +13,6 @@ columns:
   - name: Code
     description: | # Can be Markdown
       This project is open source. See `_data/footer.yml` to customize the footer.
-  
   - name: Contact
     description: | # Can be Markdown
       Social icons links defined in `_config.yml`

_data/images.yml

@@ -0,0 +1,21 @@
+irpex:
+  src: /assets/images/irpex_spiculifer_1135723338.jpg
+  caption: |
+    [Isotype of _Irpex spiculifer_ G.Cunn.](https://www.gbif.org/occurrence/1135723338) from [Manaaki Whenua - Landcare Research](/collection/034e128e-ee23-42d4-989d-cbe406c04fdb)
+puccinia:
+  src: /assets/images/puccinia-grahamii-1135811910.jpg
+  caption: |
+    [Holotype of _Puccinia grahamii_ G.Cunn.](https://www.gbif.org/occurrence/1135811910) from [Manaaki Whenua - Landcare Research](/collection/034e128e-ee23-42d4-989d-cbe406c04fdb)
+garcinia:
+  src: /assets/images/garcinia_2563424903.jpg
+  caption: |
+    [Isotype of _Garcinia urceolata_ Munzinger, Bruy & M. Pignal](https://www.gbif.org/occurrence/2563424903)
+acalypha_gillespieae:
+  src: /assets/images/acalypha_gillespieae_1258001892.jpg
+  caption: |
+    [Holotype of _Acalypha gillespieae_ G.A.Levin & I.Montero, 2020](https://www.gbif.org/occurrence/1258001892) from [Missouri Botanical Garden](/institution/1be3aa67-8f90-4309-92f4-bd55426a8c09)
+catocala_ilia_cramer:
+  src: /assets/images/catocala_ilia_cramer_2365571744.jpg
+  caption: |
+    [_Catocala ilia_ Cramer, 1779](https://www.gbif.org/occurrence/2365571744) from [Peabody Museum of Natural History](institution/75f50140-830d-4630-a290-3d6e951a7c29)
+

_data/navigation.yml

@@ -1,28 +1,10 @@
 # Links listed below will be included in your site's navbar (navigation at the top)
 
+- text: Institutions
+  href: /institution/search
+- text: Collections
+  href: /collection/search
+- text: Specimens
+  href: /specimen/search
 - text: About
   href: /about
-- text: Occurrences
-  href: /occurrence/search
-- text: Example pages
-  menu: # Dropdown menu (one level deep only)
-  - text: Simple
-    href: /example-pages/simple
-  - text: Complex
-    href: /example-pages/complex
-- text: Links
-  menu: # Dropdown menu (one level deep only)
-  - text: Base theme demo
-    href: https://hp-base-theme.gbif-staging.org/
-  - text: Other sites using the theme
-    href: https://github.com/gbif/?q=hp-&type=all&language=&sort=
-  - text: "---" # Divider to separate blocks of menu items (at least 3 "-")
-  - text: "Docs" # Title for block of menu items
-  - text: Jekyll documentation
-    href: https://jekyllrb.com/docs/pages/
-  - text: Markdown tutorial
-    href: https://guides.github.com/features/mastering-markdown/
-  - text: YAML tutorial
-    href: https://dev.to/paulasantamaria/introduction-to-yaml-125f
-- text: News
-  href: /news/