ci: fix dependencies typo

ethanbass · Aug 16, 2024 · 5214b0d · 5214b0d
1 parent 156d6e2
commit 5214b0d
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/tests/testthat/helpers.R b/tests/testthat/helpers.R
@@ -3,7 +3,7 @@
 elementwise.all.equal <- Vectorize(function(x, y, ...) {isTRUE(all.equal(x, y, ...))})
 
 # helper function to skip tests if we don't have the right python dependencies
-skip_if_missing_dependecies <- function(reqs = c("scipy","numpy", "aston", "pandas", "olefile")) {
+skip_if_missing_dependencies <- function(reqs = c("scipy","numpy", "aston", "pandas", "olefile")) {
   have_reqs <- sapply(reqs, reticulate::py_module_available)
   if (mean(have_reqs) < 1)
     skip(paste("required packages", reqs[!have_reqs],

diff --git a/tests/testthat/test-extra.R b/tests/testthat/test-extra.R
@@ -280,7 +280,7 @@ test_that("read_chroms can read 'Chromeleon' period-separated files", {
 
 test_that("read_peaklist can read `Shimadzu` ascii (PDA) files", {
   skip_on_cran()
-  skip_if_missing_dependecies()
+  skip_if_missing_dependencies()
   skip_if_not_installed("chromConverterExtraTests")
 
   path <- system.file("shimadzuDAD_Anthocyanin.txt",

diff --git a/tests/testthat/test-read_chroms.R b/tests/testthat/test-read_chroms.R
@@ -101,7 +101,7 @@ test_that("get_filetype works as expected", {
 })
 
 test_that("Rainbow parser can read chemstation 131 files", {
-  skip_if_missing_dependecies()
+  skip_if_missing_dependencies()
   skip_on_cran()
   skip_on_ci()
 
@@ -129,7 +129,7 @@ test_that("Rainbow parser can read chemstation 131 files", {
 })
 
 test_that("chromconverter parser can read chemstation 130 files", {
-  skip_if_missing_dependecies()
+  skip_if_missing_dependencies()
   skip_on_cran()
   x1 <- read_chroms("testdata/chemstation_130.ch", progress_bar = FALSE)
   # expect_equal(as.numeric(x[[1]][,1]), as.numeric(x1[[1]][,"220"]))