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Add run_pipeline() first draft#149

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Bisaloo wants to merge 9 commits intomainepiverse-trace/episoap:mainfrom run_pipelinesepiverse-trace/episoap:run_pipelinesCopy head branch name to clipboard

+126-1

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Commits on Apr 25, 2024

• Add note about parameter names in design document

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• Create run_pipeline() first draft

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• Add withr dependency to DESCRIPTION

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• Document ellipsis

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• Fix typo

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• Allow multiple report to be rendered at once

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• Document where data_file arg comes from

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• Add Karim as aut

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Commits on May 3, 2024

• Wrap in render() in Rscript_call() to isolate env session

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