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…ctures with atoms and bonds (#5983)
* Verify that bond lines between atoms do not overlap in any angle in macro mode
* screen
* Verify that connections between monomers and molecules are maintained correctly in both micro and macro modes
* Verify that switching between micro and macro modes displays molecules without structural changes
* Verify that deleting a bond in macro mode removes the bond while maintaining the integrity of the surrounding structure
* Verify that the structure in macro mode can be saved as a .ket file, and all elements including bonds and atoms are correctly restored when re-loaded
* Peptides - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode
* Bases - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode
* CHEMS - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode
* Nucleotide - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode - Part 1
* Nucleotide - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode - Part 2
* Phosphates - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode
and
HELM results correction
* Sugar - Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode
* phosphate fix
* Nucleotide fix
* Peptide fix
* phosphate fix
* Sugar fix
* CHEMs fix
* Bases fix
* Some fixes
Source task(s):
Display molecules in macro mode: basic structures with atoms and bonds #5359
Verify that connection points between monomers and molecules can be created by drawing bonds in macro mode
Verify that bond lines between atoms do not overlap in any angle in macro mode
Verify that connections between monomers and molecules are maintained correctly in both micro and macro modes
Verify that switching between micro and macro modes displays molecules without structural changes
Verify that deleting an atom in macro mode removes it along with all connected bonds without distorting the molecule structure
Verify that deleting a bond in macro mode removes the bond while maintaining the integrity of the surrounding structure
Verify that the structure in macro mode can be saved as a .ket file, and all elements including bonds and atoms are correctly restored when re-loaded
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