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Autotests: Reduce number of combinatory tests #5141

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AlexeyGirin opened this issue Jul 19, 2024 · 0 comments · Fixed by #5143
Closed

Autotests: Reduce number of combinatory tests #5141

AlexeyGirin opened this issue Jul 19, 2024 · 0 comments · Fixed by #5143
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@AlexeyGirin
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AlexeyGirin commented Jul 19, 2024 •
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Remove all tests that uses more unlikely monomers.
According to @ljubica-milovic following monomer AP combination are highly likely to exist in real life:

Nucleotide:

  • (R1) - Left only
  • (R2) - Right only
  • (R1,R2) - R3 gap
  • (R1,R3) - R2 gap
  • (R2,R3) - R1 gap
  • (R1,R2,R3)

Peptide:

  • (R1) - Left only
  • (R2) - Right only
  • (R1,R2) - R3 gap
  • (R1,R3) - R2 gap
  • (R2,R3) - R1 gap
  • (R1,R2,R3)

CHEM:

  • (R1) - Left only
  • (R2) - Right only
  • (R1,R2) - R3 gap
  • (R1,R2,R3)
  • (R1,R2,R3,R4)

Phosphate:

  • (R1) - Left only
  • (R2) - Right only
  • (R1,R2) - R3 gap

Base:

  • (R1) - Left only
  • (R1,R2) - R3 gap

Sugar:

  • (R1) - Left only
  • (R2) - Right only
  • (R1,R2) - R3 gap
  • (R1,R3) - R2 gap
  • (R2,R3) - R1 gap
  • (R1,R2,R3)

Micromolecule:

  • (R1) - Left only
  • (R2) - Right only
  • (R3) - Side only
  • (R1,R2) - R3 gap
  • (R1,R3) - R2 gap
  • (R2,R3) - R1 gap
  • (R1,R2,R3)
  • (R1,R2,R3,R4)
  • (R1,R2,R3,R4,R5)
@AlexeyGirin AlexeyGirin added this to the Autotests milestone Jul 19, 2024
@AlexeyGirin AlexeyGirin linked a pull request Jul 19, 2024 that will close this issue
Autotests: #5141 - reduce number of combinatory tests #5143
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AlexeyGirin added a commit that referenced this issue Jul 22, 2024
@AlexeyGirin
Autotests: #5141 - reduce number of combinatory tests (#5143)
305a34d 
* 5141 - Nucleotides connection rules are done

* 5141 - Bases connection rules are done

* 5141 - CHEMs connection rules are done

* 5141 - peptides connection rules are done

* 5141 - phosphates connection rules are done

* 5141 - rna connection rules are done

* 5141 - Sugar connection rules are done

* 5141 - removing of unnecessary screenshots
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Autotests: #5141 - reduce number of combinatory tests epam/ketcher
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