Dicom2OMOP

This project looks at creating a controlled vocabulary for the DICOM Pt 6 Data Dictionary with a focus on CS code strings in the OMOP vocabulary format and harmonizing common data elements (CDE).

• Create a library that takes a dicom tag
• • (eg Part 6 0010,0040 Patient Sex)
  • (Link to Part 16 CID 7455 Sex)
  • (Ingest FHIR JSON)
  • (Create "maps to" from Source to Standard vocabulary for OMOP gender)
• Identify current gaps in SNOMED and LOINC mapping from DICOM

References

• Part 5 of Dicom Standard identifying Code Structures.
• Part 6 Dicom Data Dictionary
• Part 16 Dicom Context Groups
• OHDSI Vocabulary Tables CDM 5.4
• DICOM Vocab Browser