Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix compileOutput.py script to run on viralflow env #29

Merged
merged 2 commits into from
Nov 3, 2023

Conversation

alexandrefreitasdasilva
Copy link
Collaborator

This PR changes the way of compileOutput.py script runs to work on viralflow env due to some inconsistencies when running inside the container on HPC.

Copy link
Owner

@dezordi dezordi left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

boa, só ajustar o env.yml

envs/env.yml Outdated
@@ -49,6 +49,8 @@ dependencies:
- openssl=3.0.5=h166bdaf_2
- pip=22.3=pyhd8ed1ab_0
- python=3.9.13=h2660328_0_cpython
- pandas
Copy link
Owner

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

incluir as versões do pandas e do bipython no env

Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Done!

@dezordi dezordi self-requested a review October 11, 2023 23:12
@alexandrefreitasdasilva alexandrefreitasdasilva merged commit 8b52663 into develop Nov 3, 2023
@dezordi dezordi deleted the develop_fixcompiled branch November 20, 2023 23:57
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants