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@deMirandaLab

deMirandaLab

Github of the Cancer ImmunoGenomics group at the Leiden university medical center

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  1. MALDI-MSI-IMC MALDI-MSI-IMC Public

    Code to integrate MALDI-MSI and Imaging mass cytometry data

    Python 7 2

  2. PENGUIN_fork PENGUIN_fork Public

    Forked from marta-seq/PENGUIN

    Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry

    Jupyter Notebook 3

Repositories

Showing 5 of 5 repositories
  • PENGUIN Public

    Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry

    deMirandaLab/PENGUIN’s past year of commit activity
    Jupyter Notebook 2 GPL-3.0 0 0 0 Updated Jan 25, 2025
  • IMC_analysis_pack Public

    Software & Workflow for the analysis of imaging mass cytometry data

    deMirandaLab/IMC_analysis_pack’s past year of commit activity
    R 0 0 0 0 Updated Jan 13, 2025
  • SABR Public

    Workflow for Semi-automated background removal to normalise imaging mass cytometry data

    deMirandaLab/SABR’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jan 13, 2025
  • PENGUIN_fork Public Forked from marta-seq/PENGUIN

    Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry

    deMirandaLab/PENGUIN_fork’s past year of commit activity
    Jupyter Notebook 3 GPL-3.0 1 0 0 Updated Dec 3, 2024
  • MALDI-MSI-IMC Public

    Code to integrate MALDI-MSI and Imaging mass cytometry data

    deMirandaLab/MALDI-MSI-IMC’s past year of commit activity
    Python 7 GPL-3.0 2 0 0 Updated May 9, 2024

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