Releases: davemcg/SeeGEM
Releases · davemcg/SeeGEM
Create report directly from VCF
Uses vcfR package to import VCF and convert to tibble. With some lightly tweaked templates, this can create a SeeGEM html output. Useful if you want to quickly check a VCF.
Set default output directory for knit file to working directory
v0.1.2 (not listed) was just typo fixing for CRAN submission. v0.1.3 sets the output directory for the knit output to your working directory instead of ~/ (bad author!)
Bug fixes, error handling
Check if 'family_members' is present in data frame
Move loading of GEMINI_data from Rmd template to knit_see_gem.R
Add decoration option to Rmd as param
First public release
Passes devtools::check() (with note about being a touch too large - 5.4mb)