Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Remove serial international samples for targeted trees #1707

Merged
merged 1 commit into from
Sep 5, 2024
Merged

Conversation

danrlu
Copy link
Collaborator

@danrlu danrlu commented Sep 5, 2024

The evolutionary rates for different mpox clades vary greatly. We currently don't tree builds that focus on a clade, so targeted trees are the closest alternatives. This PR removes the randomly selected international samples from targeted trees so we don't add samples from random clades to the tree.

Copy link
Collaborator

@phoenixAja phoenixAja left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

yay!

@danrlu danrlu merged commit 0022183 into trunk Sep 5, 2024
12 checks passed
@danrlu danrlu deleted the danrlu-patch-1 branch September 5, 2024 21:56
thanhleviet pushed a commit to theiagenghi/theiagenepi that referenced this pull request Sep 12, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants