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R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)

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cBioPortal/cgdsr

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The package provides a basic set of R functions for querying the Cancer Genomics Data Server (CGDS), hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).

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Install cgdsr Development Version from GitHub

setRepositories(ind=1:6)
options(repos="http://cran.rstudio.com/")
if(!require(devtools)) { install.packages("devtools") }
library(devtools) 

install_github("cBioPortal/cgdsr")

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R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)

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