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Report more info in the ref alleles don't match #6723

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merged 2 commits into from
Aug 3, 2020
Merged

Report more info in the ref alleles don't match #6723

merged 2 commits into from
Aug 3, 2020

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ldgauthier
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Closes #6701

@ldgauthier ldgauthier requested a review from droazen July 23, 2020 19:49
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gatk-bot commented Jul 23, 2020 •
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Travis reported job failures from build 31014
Failures in the following jobs:

Test Type JDK Job ID Logs
integration openjdk11 31014.12 logs
integration openjdk8 31014.2 logs

@droazen droazen self-assigned this Jul 27, 2020
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droazen approved these changes Aug 3, 2020
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👍

@droazen droazen merged commit 6a0853d into master Aug 3, 2020
@droazen droazen deleted the ldg_FilterVariantTranchesError branch August 3, 2020 19:50
mwalker174 pushed a commit that referenced this pull request Nov 3, 2020
@ldgauthier @mwalker174
FilterVariantTranches: report more info when the ref alleles don't ma…
2f0f3a7 
…tch (#6723)

Report more info in the error message when the ref alleles don't match between the input VCF and the resource VCF(s) in FilterVariantTranches
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@droazen droazen droazen approved these changes

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Successfully merging this pull request may close these issues.

FilterVariantTranches error with version 4.1.8.0
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@ldgauthier @gatk-bot @droazen