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Fixed an error message in SVD utils #6608

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May 18, 2020
Merged

Fixed an error message in SVD utils #6608

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4 changes: 2 additions & 2 deletions ...main/java/org/broadinstitute/hellbender/tools/copynumber/denoising/SVDDenoisingUtils.java
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Original file line number Diff line number Diff line change
Expand Up @@ -482,8 +482,8 @@ private static void divideBySampleMedianAndTransformToLog2(final RealMatrix matr
IntStream.range(0, sampleMedians.length).forEach(sampleIndex ->
ParamUtils.isPositive(sampleMedians[sampleIndex],
sampleMedians.length == 1
? "Sample does not have a non-negative sample median."
: String.format("Sample at index %s does not have a non-negative sample median.", sampleIndex)));
? "Sample does not have a positive sample median."
: String.format("Sample at index %s does not have a positive sample median.", sampleIndex)));
matrix.walkInOptimizedOrder(new DefaultRealMatrixChangingVisitor() {
@Override
public double visit(int sampleIndex, int intervalIndex, double value) {
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