Removing doc reference to gatk3 annotation that not longer exists (#6679

)
broadinstitute · Jun 29, 2020 · 79a4cda · 79a4cda
1 parent 781bd88
commit 79a4cda
Showing 1 changed file with 0 additions and 6 deletions.
diff --git a/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/PossibleDeNovo.java b/src/main/java/org/broadinstitute/hellbender/tools/walkers/annotator/PossibleDeNovo.java
@@ -32,12 +32,6 @@
  *     <li>When multiple trios are present, the annotation is simply the maximum of the likelihood ratios, rather than the strict 1-Prod(1-p_i) calculation, as this can scale poorly for uncertain sites and many trios.</li>
  *     <li>This annotation can only be used from the Variant Annotator. If you attempt to use it from the UnifiedGenotyper, the run will fail with an error message to that effect. If you attempt to use it from the HaplotypeCaller, the run will complete successfully but the annotation will not be added to any variants.</li>
  * </ul>
- *
- * <h3>Related annotations</h3>
- * <ul>
- *     <li><b><a href="https://www.broadinstitute.org/gatk/guide/tooldocs/org_broadinstitute_gatk_tools_walkers_annotator_MVLikelihoodRatio.php">MVLikelihoodRatio</a></b> evaluates whether a site is transmitted from parents to offspring according to Mendelian rules or not.</li>
- * </ul>
- *
  */
 @DocumentedFeature(groupName=HelpConstants.DOC_CAT_ANNOTATORS, groupSummary=HelpConstants.DOC_CAT_ANNOTATORS_SUMMARY, summary="Existence of a de novo mutation in at least one of the given families (hiConfDeNovo, loConfDeNovo)")
 public final class PossibleDeNovo extends PedigreeAnnotation {