The GenomicInteractionNodes package define genomic interaction hot regions
as interaction nodes with following attributes:
-
it must contain multiple interaction loops,
-
it regulates one or more target genes.
You can install the package via devtools::install_github from github.
library(devtools)
install_github("jianhong/GenomicInteractionNodes")
You can also try to install it via BiocManager::install when it is ready in Bioconductor.
library(BiocManager)
install("GenomicInteractionNodes")
To view documentation of GenomicInteractionNodes, start R and enter:
browseVignettes("GenomicInteractionNodes")