Prep for move to bigdatagenomics org

[fnothaft]

I've set up Jenkins, will still need to set up coveralls after the move.

[AmplabJenkins]

Merged build finished. Test FAILed.

[AmplabJenkins]

Test FAILed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/4/
Test FAILed.

[fnothaft]

Jenkins, retest this please.

[AmplabJenkins]

Merged build finished. Test FAILed.

[AmplabJenkins]

Test FAILed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/5/

Build result: FAILURE

[...truncated 16 lines...] > /home/jenkins/git2/bin/git rev-parse origin/pr/19/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a --contains 2af2fe695be922b12e8c7cb485f5ac445660eff1 # timeout=10 > /home/jenkins/git2/bin/git rev-parse remotes/origin/pr/19/merge^{commit} # timeout=10Checking out Revision 2af2fe695be922b12e8c7cb485f5ac445660eff1 (origin/pr/19/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f 2af2fe695be922b12e8c7cb485f5ac445660eff1First time build. Skipping changelog.Triggering cannoli-prb ? 2.6.0,2.10,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.11,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.11,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.10,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.10,2.0.0,centosTriggering cannoli-prb ? 2.3.0,2.11,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.10,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.11,1.6.1,centoscannoli-prb ? 2.6.0,2.10,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.11,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.11,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.10,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.10,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.11,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.10,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.11,1.6.1,centos completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

[heuermh]

Thanks! Looks like the failure is due to github API stuff?

I wasn't sure if it would be messy to do the move while pull requests were still outstanding. Any thoughts on sequencing?

[heuermh]

After a quick look, only minor changes are needed for #11 and #13, so it should be possible to get all the pull requests in quickly and then do the migration.

[fnothaft]

You should be able to move the whole repository, IIRC, which keeps the PRs and issue tracker, etc. Let me take a look...

[fnothaft]

Jenkins, retest this please.

[AmplabJenkins]

Merged build finished. Test FAILed.

[AmplabJenkins]

Test FAILed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/6/

Build result: FAILURE

[...truncated 16 lines...] > /home/jenkins/git2/bin/git rev-parse origin/pr/19/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a --contains 2af2fe695be922b12e8c7cb485f5ac445660eff1 # timeout=10 > /home/jenkins/git2/bin/git rev-parse remotes/origin/pr/19/merge^{commit} # timeout=10Checking out Revision 2af2fe695be922b12e8c7cb485f5ac445660eff1 (origin/pr/19/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f 2af2fe695be922b12e8c7cb485f5ac445660eff1First time build. Skipping changelog.Triggering cannoli-prb ? 2.6.0,2.10,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.11,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.11,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.10,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.10,2.0.0,centosTriggering cannoli-prb ? 2.3.0,2.11,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.10,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.11,1.6.1,centoscannoli-prb ? 2.6.0,2.10,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.11,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.11,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.10,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.10,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.11,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.10,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.11,1.6.1,centos completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

[AmplabJenkins]

Test FAILed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/7/

Build result: FAILURE

[...truncated 16 lines...] > /home/jenkins/git2/bin/git rev-parse origin/pr/19/merge^{commit} # timeout=10 > /home/jenkins/git2/bin/git branch -a --contains 23b76edb6c444496b9d206d182806b46cc894ecb # timeout=10 > /home/jenkins/git2/bin/git rev-parse remotes/origin/pr/19/merge^{commit} # timeout=10Checking out Revision 23b76edb6c444496b9d206d182806b46cc894ecb (origin/pr/19/merge) > /home/jenkins/git2/bin/git config core.sparsecheckout # timeout=10 > /home/jenkins/git2/bin/git checkout -f 23b76edb6c444496b9d206d182806b46cc894ecbFirst time build. Skipping changelog.Triggering cannoli-prb ? 2.6.0,2.10,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.11,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.11,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.10,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.10,2.0.0,centosTriggering cannoli-prb ? 2.3.0,2.11,2.0.0,centosTriggering cannoli-prb ? 2.6.0,2.10,1.6.1,centosTriggering cannoli-prb ? 2.3.0,2.11,1.6.1,centoscannoli-prb ? 2.6.0,2.10,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.11,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.11,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.10,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.10,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.11,2.0.0,centos completed with result FAILUREcannoli-prb ? 2.6.0,2.10,1.6.1,centos completed with result FAILUREcannoli-prb ? 2.3.0,2.11,1.6.1,centos completed with result FAILURENotifying endpoint 'HTTP:https://webhooks.gitter.im/e/ac8bb6e9f53357bc8aa8'
Test FAILed.

[coveralls]

Changes Unknown when pulling e13f920 on fnothaft:prep-for-move into ** on bigdatagenomics:master**.

[AmplabJenkins]

Test PASSed.
Refer to this link for build results (access rights to CI server needed):
https://amplab.cs.berkeley.edu/jenkins//job/cannoli-prb/8/
Test PASSed.

[heuermh]

Want to squash any before merging?

[fnothaft]

Confirm with

cannoli fnothaft$ mvn versions:display-plugin-updates | grep require
[INFO] Plugins require minimum Maven version of: 3.0.4

Want to squash any before merging?

Choice is yours; I'd be fine squashing all the way down.

[heuermh]

Choice is yours; I'd be fine squashing all the way down.

Go fer it, then I'll merge

[fnothaft]

@heuermh you can just squash with the merge button.