Merge branch 'medplum:main' into main

awsm-eng · Feb 23, 2024 · 4ed21d6 · 4ed21d6
2 parents bf27db1 + ffd7ce1
commit 4ed21d6
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diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml
@@ -15,16 +15,16 @@ jobs:
   build:
     name: Build
     runs-on: ubuntu-latest
+    permissions:
+      pull-requests: write
     strategy:
       matrix:
         node-version: [18, 20]
         pg-version: [12, 14]
     env:
       NODE_VERSION: ${{ matrix.node-version }}
       PG_VERSION: ${{ matrix.pg-version }}
-      TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
-      TURBO_TEAM: 'medplum'
-      TURBO_REMOTE_ONLY: true
+      SECRETS_TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
     services:
       postgres:
         image: postgres:${{ matrix.pg-version }}
@@ -40,15 +40,15 @@ jobs:
         ports:
           - 5432/tcp
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: ${{ matrix.node-version }}
           registry-url: 'https://registry.npmjs.org'
       - name: Cache node modules
-        uses: actions/cache@v3
+        uses: actions/cache@v4
         env:
           cache-name: cache-node-modules
         with:
@@ -58,6 +58,16 @@ jobs:
             ${{ runner.os }}-build-${{ env.cache-name }}-
             ${{ runner.os }}-build-
             ${{ runner.os }}-
+      - name: Setup TurboRepo
+        # Conditionally setup turborepo
+        # In the past, turborepo would silently ignore empty environment variables
+        # This is no longer the case, so we need to check if the secret is set
+        # You cannot use `if: ${{ secrets.TURBO_TOKEN != '' }}` because secrets are not available in the `if` condition
+        if: ${{ env.SECRETS_TURBO_TOKEN != '' }}
+        run: |
+          echo "TURBO_TOKEN=${{ secrets.TURBO_TOKEN }}" >> $GITHUB_ENV
+          echo "TURBO_TEAM=${{ secrets.TURBO_TEAM }}" >> $GITHUB_ENV
+          echo "TURBO_REMOTE_ONLY=${{ secrets.TURBO_REMOTE_ONLY }}" >> $GITHUB_ENV
       - name: Build Project
         run: ./scripts/build.sh
         env:
@@ -72,7 +82,8 @@ jobs:
           POSTGRES_HOST: localhost
           POSTGRES_PORT: ${{ job.services.postgres.ports[5432] }}
       - name: Upload code coverage
-        uses: actions/upload-artifact@v3
+        if: ${{ matrix.node-version == 20 && matrix.pg-version == 14 }}
+        uses: actions/upload-artifact@v4
         with:
           name: medplum-code-coverage
           path: coverage/lcov.info

diff --git a/.github/workflows/codeql-analysis.yml b/.github/workflows/codeql-analysis.yml
@@ -44,7 +44,7 @@ jobs:
 
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       # Initializes the CodeQL tools for scanning.
       - name: Initialize CodeQL

diff --git a/.github/workflows/coveralls.yml b/.github/workflows/coveralls.yml
@@ -9,7 +9,7 @@ jobs:
     runs-on: ubuntu-latest
     if: github.event.workflow_run.conclusion == 'success'
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           repository: ${{ github.event.workflow_run.head_repository.full_name }}
           ref: ${{ github.event.workflow_run.head_branch }}

diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
@@ -13,18 +13,18 @@ jobs:
     env:
       NODE_VERSION: '20'
       TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
-      TURBO_TEAM: 'medplum'
-      TURBO_REMOTE_ONLY: true
+      TURBO_TEAM: ${{ secrets.TURBO_TEAM }}
+      TURBO_REMOTE_ONLY: ${{ secrets.TURBO_REMOTE_ONLY }}
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'
       - name: Cache node modules
-        uses: actions/cache@v3
+        uses: actions/cache@v4
         env:
           cache-name: cache-node-modules
         with:

diff --git a/.github/workflows/madge.yml b/.github/workflows/madge.yml
@@ -16,15 +16,15 @@ jobs:
     outputs:
       madge_check_errs: ${{ steps.madge.outputs.madge_check_errs }}
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'
       - name: Cache node modules
-        uses: actions/cache@v3
+        uses: actions/cache@v4
         env:
           cache-name: cache-node-modules
         with:

diff --git a/.github/workflows/prepare-release.yml b/.github/workflows/prepare-release.yml
@@ -7,11 +7,11 @@ jobs:
     name: Prepare release
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
           token: ${{ secrets.MEDPLUM_BOT_GITHUB_ACCESS_TOKEN }}
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'

diff --git a/.github/workflows/prettier-fmt.yml b/.github/workflows/prettier-fmt.yml
@@ -15,18 +15,20 @@ jobs:
   prettier-fmt:
     name: prettier
     runs-on: ubuntu-latest
+    permissions:
+      pull-requests: write
     outputs:
       prettier_fmt_errs: ${{ steps.fmt.outputs.prettier_fmt_errs }}
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'
       - name: Cache node modules
-        uses: actions/cache@v3
+        uses: actions/cache@v4
         env:
           cache-name: cache-node-modules
         with:
@@ -97,5 +99,5 @@ jobs:
           echo "See: https://marketplace.visualstudio.com/items?itemName=esbenp.prettier-vscode"
           echo ""
           echo "https://github.com/medplum/medplum/commits/${{github.sha}}"
-          
+
           exit 1
diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
@@ -13,24 +13,24 @@ jobs:
       SLACK_WEBHOOK_URL: ${{ secrets.SLACK_WEBHOOK_URL }}
       SLACK_WEBHOOK_TYPE: INCOMING_WEBHOOK
       TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
-      TURBO_TEAM: 'medplum'
-      TURBO_REMOTE_ONLY: true
+      TURBO_TEAM: ${{ secrets.TURBO_TEAM }}
+      TURBO_REMOTE_ONLY: ${{ secrets.TURBO_REMOTE_ONLY }}
     permissions:
       actions: read
       contents: write
       pull-requests: write
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - name: Setup Node.js
-        uses: actions/setup-node@v3
+        uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'
 
       - name: Cache node modules
-        uses: actions/cache@v3
+        uses: actions/cache@v4
         env:
           cache-name: cache-node-modules
         with:
@@ -96,14 +96,14 @@ jobs:
     env:
       NODE_VERSION: '20'
       TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
-      TURBO_TEAM: 'medplum'
-      TURBO_REMOTE_ONLY: true
+      TURBO_TEAM: ${{ secrets.TURBO_TEAM }}
+      TURBO_REMOTE_ONLY: ${{ secrets.TURBO_REMOTE_ONLY }}
     permissions:
       actions: read
       contents: write
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - name: Install NSIS
         run: choco install nsis
@@ -118,7 +118,7 @@ jobs:
           java-version: '17'
 
       - name: Setup Node.js
-        uses: actions/setup-node@v3
+        uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'
@@ -171,17 +171,17 @@ jobs:
     env:
       NODE_VERSION: '20'
       TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
-      TURBO_TEAM: 'medplum'
-      TURBO_REMOTE_ONLY: true
+      TURBO_TEAM: ${{ secrets.TURBO_TEAM }}
+      TURBO_REMOTE_ONLY: ${{ secrets.TURBO_REMOTE_ONLY }}
     permissions:
       actions: read
       contents: write
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
 
       - name: Setup Node.js
-        uses: actions/setup-node@v3
+        uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'

diff --git a/.github/workflows/sonar.yml b/.github/workflows/sonar.yml
@@ -9,7 +9,7 @@ jobs:
     runs-on: ubuntu-latest
     if: github.event.workflow_run.conclusion == 'success'
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           repository: ${{ github.event.workflow_run.head_repository.full_name }}
           ref: ${{ github.event.workflow_run.head_branch }}

diff --git a/.github/workflows/staging.yml b/.github/workflows/staging.yml
@@ -13,18 +13,18 @@ jobs:
     env:
       NODE_VERSION: '20'
       TURBO_TOKEN: ${{ secrets.TURBO_TOKEN }}
-      TURBO_TEAM: 'medplum'
-      TURBO_REMOTE_ONLY: true
+      TURBO_TEAM: ${{ secrets.TURBO_TEAM }}
+      TURBO_REMOTE_ONLY: ${{ secrets.TURBO_REMOTE_ONLY }}
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'
       - name: Cache node modules
-        uses: actions/cache@v3
+        uses: actions/cache@v4
         env:
           cache-name: cache-node-modules
         with:

diff --git a/.github/workflows/upgrade-dependencies.yml b/.github/workflows/upgrade-dependencies.yml
@@ -1,17 +1,22 @@
 name: Upgrade dependencies
 
-on: workflow_dispatch
+on:
+  workflow_dispatch:
+  schedule:
+    # Every Monday at 9:00 AM UTC
+    # Every Monday at 1:00 AM PST (2:00 AM PDT)
+    - cron: '0 9 * * 1'
 
 jobs:
   upgrade-dependencies:
     name: Upgrade dependencies
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
           token: ${{ secrets.MEDPLUM_BOT_GITHUB_ACCESS_TOKEN }}
-      - uses: actions/setup-node@v3
+      - uses: actions/setup-node@v4
         with:
           node-version: 20
           registry-url: 'https://registry.npmjs.org'

diff --git a/examples/foomedical/package.json b/examples/foomedical/package.json
@@ -1,6 +1,6 @@
 {
   "name": "foomedical",
-  "version": "3.0.2",
+  "version": "3.0.4",
   "type": "module",
   "scripts": {
     "build": "tsc && vite build",
@@ -25,21 +25,21 @@
     "@babel/preset-env": "7.23.9",
     "@babel/preset-react": "7.23.3",
     "@babel/preset-typescript": "7.23.3",
-    "@mantine/core": "7.5.0",
-    "@mantine/hooks": "7.5.0",
-    "@mantine/notifications": "7.5.0",
-    "@medplum/core": "3.0.2",
-    "@medplum/eslint-config": "3.0.2",
-    "@medplum/fhirtypes": "3.0.2",
-    "@medplum/mock": "3.0.2",
-    "@medplum/react": "3.0.2",
-    "@tabler/icons-react": "2.46.0",
-    "@testing-library/jest-dom": "6.3.0",
-    "@testing-library/react": "14.1.2",
-    "@types/jest": "29.5.11",
-    "@types/node": "20.11.8",
-    "@types/react": "18.2.48",
-    "@types/react-dom": "18.2.18",
+    "@mantine/core": "7.5.3",
+    "@mantine/hooks": "7.5.3",
+    "@mantine/notifications": "7.5.3",
+    "@medplum/core": "3.0.4",
+    "@medplum/eslint-config": "3.0.4",
+    "@medplum/fhirtypes": "3.0.4",
+    "@medplum/mock": "3.0.4",
+    "@medplum/react": "3.0.4",
+    "@tabler/icons-react": "2.47.0",
+    "@testing-library/jest-dom": "6.4.2",
+    "@testing-library/react": "14.2.1",
+    "@types/jest": "29.5.12",
+    "@types/node": "20.11.19",
+    "@types/react": "18.2.56",
+    "@types/react-dom": "18.2.19",
     "@vitejs/plugin-react": "4.2.1",
     "babel-jest": "29.7.0",
     "c8": "9.1.0",
@@ -48,13 +48,13 @@
     "jest": "29.7.0",
     "jest-environment-jsdom": "29.7.0",
     "jest-transform-stub": "2.0.0",
-    "postcss": "8.4.33",
-    "postcss-preset-mantine": "1.12.3",
+    "postcss": "8.4.35",
+    "postcss-preset-mantine": "1.13.0",
     "react": "18.2.0",
     "react-chartjs-2": "5.2.0",
     "react-dom": "18.2.0",
-    "react-router-dom": "6.21.3",
+    "react-router-dom": "6.22.1",
     "typescript": "5.3.3",
-    "vite": "5.0.12"
+    "vite": "5.1.3"
   }
 }