v1.2.0 release #778
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v1.2.0 release #778
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* Initial changelog formatting issues * Update changelog + instructions * Updated changelog
* Updated Code of conduct * Updated changelog * Fixed grammar * Fix zenodo DOI
* Shorten names * Updated changelog
* timing and memory benchmark * delete raw initial * adding profiler * optimisation handling exceptions * Added logging * Updated delete_run * Fix syntax errors * Disable triggers to see if that fixes speed issues * Remove memory profiling * Reenabled logging * Add end of loop logging, remove tqdm * Remove all tqdm, improve logging slightly * Added timing * Fixed tqdm missing * Fix logging * Added units to logging * specify source id in logging * Toggle triggers * clean up clearpiperun * Other minor updates * Fix variable name * Correctly handle images and skyregions that are associated with multiple runs * PEP8 * Updated changelog * Remove commented code * Remove whitespace - don't know why the linter didn't pick this up * Update vast_pipeline/management/commands/clearpiperun.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/management/commands/clearpiperun.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/management/commands/clearpiperun.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/management/commands/clearpiperun.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Update vast_pipeline/utils/delete_run.py Co-authored-by: Tom Mauch <[email protected]> * Fix logging count * Clean up logging statements --------- Co-authored-by: Shibli Saleheen <[email protected]> Co-authored-by: Tom Mauch <[email protected]>
* Use itertuples over iterrows since iterrows is an enormous memory hog. * Drop sources_df columns before renaming id column to avoid a copy of the while dataframe in memory. * Decrease default partition size to 15MB * Dont split (large-in-memory) list of DataFrames into dask bags (No performance hit). * Don't write forced parquets in parallel (No perfomance hit for this). * Dont overwrite input DataFrame when writing parquets. * Update CHANGELOG.md * Address review comments. * Copy YAML objects before revalidation so the can be garbage collected. * Appease flake8
* Use itertuples over iterrows since iterrows is an enormous memory hog. * Drop sources_df columns before renaming id column to avoid a copy of the while dataframe in memory. * Decrease default partition size to 15MB * Dont split (large-in-memory) list of DataFrames into dask bags (No performance hit). * Don't write forced parquets in parallel (No perfomance hit for this). * Initial configuration updates for processing options. * Dont overwrite input DataFrame when writing parquets. * Update CHANGELOG.md * Address review comments. * Copy YAML objects before revalidation so the can be garbage collected. * Appease flake8 * Add processing options as optional with defaults. * filter processing config to parallel association. * Add a funtion to determine the number of workers and partitions for Dask. * Use config values for num_workers and max_partition_size throughout pipeline. * Correct working in config template. * Update CHANGELOG.md * Remove unused imports. * Bump strictyaml to 1.6.2 * Use YAML 'null' to create Python None for all cores option. * Make None the default in `calculate_workers_and_partitions` instead of 0 * Updated run config docs * Allow null for num_workers_io and improve validation of processing parameters. * Update num_workers_io default in docs. --------- Co-authored-by: Dougal Dobie <[email protected]>
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