Suppress astropy warnings

pipeline/config_template.py.j2

@@ -102,3 +102,6 @@ USE_CONDON_ERRORS = {{ use_condon_errors }}
 # Sometimes the local rms for a source is reported as 0 by selavy.
 # Choose a value to use for the local rms in these cases
 SELAVY_LOCAL_RMS_ZERO_FILL_VALUE = {{ selavy_local_rms_zero_fill_value }}  # mJy
+
+# Hide astropy warnings
+SUPPRESS_ASTROPY_WARNINGS = {{ suppress_astropy_warnings }}

pipeline/forms.py

@@ -23,3 +23,4 @@ class PipelineRunForm(forms.Form):
     flux_perc_error = forms.FloatField()
     selavy_local_rms_zero_fill_value = forms.FloatField()
     use_condon_errors = forms.BooleanField(required=False)
+    suppress_astropy_warnings = forms.BooleanField(required=False)

pipeline/management/commands/runpipeline.py

@@ -1,6 +1,7 @@
 import os
 import logging
 import traceback
+import warnings
 
 from django.core.management.base import BaseCommand, CommandError
 
@@ -9,6 +10,7 @@
 from pipeline.pipeline.utils import get_create_p_run
 from pipeline.utils.utils import StopWatch
 from ..helpers import get_p_run_name
+from astropy.utils.exceptions import AstropyWarning
 
 
 logger = logging.getLogger(__name__)
@@ -64,6 +66,9 @@ def handle(self, *args, **options):
             logger.exception('Config error:\n%s', e)
             raise CommandError(f'Config error:\n{e}')
 
+        if pipeline.config.SUPPRESS_ASTROPY_WARNINGS:
+            warnings.simplefilter("ignore", category=AstropyWarning)
+
         # Create the pipeline run in DB
         p_run, flag_exist = get_create_p_run(
             pipeline.name,

templates/generic_table.html

@@ -234,12 +234,19 @@ <h5 class="modal-title m-0 font-weight-bold text-primary" id="exampleModalLabel"
               </div>
             </div>
             <div class="custom-control custom-switch">
-              <input type="checkbox" class="custom-control-input" id="condomErrorSwitch" {% if runconfig.use_condon_errors %} checked="checked" {% endif %} name="use_condon_errors">
-              <label class="custom-control-label font-weight-bold text-gray-800" for="condomErrorSwitch">Use Condon Errors</label>
+              <input type="checkbox" class="custom-control-input" id="condonErrorSwitch" {% if runconfig.use_condon_errors %} checked="checked" {% endif %} name="use_condon_errors">
+              <label class="custom-control-label font-weight-bold text-gray-800" for="condonErrorSwitch">Use Condon Errors</label>
               <a href="#" data-toggle="tooltip" data-placement="top" title=
                   "Replaces the selavy catalogue flux and positional errors with those defined by Condon '97, calculated by the pipeline."
               ><i class="fas fa-info-circle"></i></a>
             </div>
+            <div class="custom-control custom-switch">
+              <input type="checkbox" class="custom-control-input" id="astropyWarnSwitch" {% if runconfig.suppress_astropy_warnings %} checked="checked" {% endif %} name="suppress_astropy_warnings">
+              <label class="custom-control-label font-weight-bold text-gray-800" for="astropyWarnSwitch">Suppress Astropy Warnings</label>
+              <a href="#" data-toggle="tooltip" data-placement="top" title=
+                  "Removes the Astropy warnings from the pipeline run output."
+              ><i class="fas fa-info-circle"></i></a>
+            </div>
           </div>
           <div class="modal-footer">
             <button class="btn btn-secondary btn-icon-split" type="button" data-dismiss="modal">

webinterface/settings.py

@@ -297,6 +297,7 @@
     'flux_perc_error': 0,
     'use_condon_errors': True,
     'selavy_local_rms_zero_fill_value': 0.2,
+    'suppress_astropy_warnings': True
 }
 
 # default max concurrent pipeline runs