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To see all available qualifiers, see our documentation.
These are the methods included with angsd-wrapper. Entries marked with * can be graphed with the shiny graphing application.
2D Site Frequency Spectrum
ABBA BABA/D-Stat*
Admixture*
Ancestral Sequence
Fst*
Genotype Likelihoods
Inbreeding Coefficients
Principle Components Analysis*
Site Frequency Spectrum*
Thetas Calculator*