A more compact and useful representation for unphased data #13
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For unphased data, each variant stores the number of copies that it represents (1...ploidy). E.g., for diploid data you'll have potentially two copies of each variant, one with num_copies=1 and one with num_copies=2 (homozygotes). Included is an example that shows how to calculate ROH from this format.
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For unphased data, each variant stores the number of copies that it represents (1...ploidy). E.g., for diploid data you'll have potentially two copies of each variant, one with num_copies=1 and one with num_copies=2 (homozygotes).
Included is an example that shows how to calculate ROH from this format.