CI - Tests

Update `pre-commit` hooks (#550) #736

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Run time

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Job	Run time
docker-mongo	6m 11s
docker (aiida)	5m 20s
docker-mongo-filename	4m 12s
docker (mongo)	3m 56s
build-package	1m 21s
pre-commit	36s
pytest (3.9)	9m 38s
pytest (3.10)	9m 31s
pytest (3.11)	9m 32s
	50m 17s