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Fixed mode call
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Waztom committed Dec 15, 2023
1 parent 0094eb8 commit 36f4136
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Showing 2 changed files with 4 additions and 4 deletions.
2 changes: 1 addition & 1 deletion mscheck/__init__.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
"""mscheck initialization."""
__name__ = "mscheck"
__version__ = "v0.3.0-beta"
__version__ = "v0.3.1-beta"

from .spectrum import MassSpectrum
from .analyse import AnalyseSpectrum
6 changes: 3 additions & 3 deletions mscheck/spectrum.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ def __init__(self, mzMLfilepath: str, mode: str = "Positive"):
to Positive.
"""
self._filepath = mzMLfilepath
self._mode = mode
self.mode = mode
self._exp = self._create_openms()
self.MSdata = self._get_ms_data()

Expand All @@ -28,9 +28,9 @@ def _create_openms(self) -> None:
"""
openms = MSExperiment()
MzMLFile().load(self._filepath, openms)
if self._mode == "Positive":
if self.mode == "Positive":
openms = [spectrum for i, spectrum in enumerate(openms) if i % 2 == 0]
if self._mode == "Negative":
if self.mode == "Negative":
openms = [spectrum for i, spectrum in enumerate(openms) if i % 2 != 0]
return openms

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