Skip to content

AMULET v1.1

Latest
Compare
Choose a tag to compare
@ajt986 ajt986 released this 10 Sep 18:19
· 6 commits to main since this release

This release adds code to skip comment lines in fragment files from Cell Ranger ATAC 2.0.

The restriction list sites can be downloaded from the previous release. Alternatively these files can be obtained by combining restriction sites (tab delimited chr star end file format) from ENCODE with repetitive elements such as simple repeats and segmental duplications from RepeatMasker/UCSC Genome Browser.