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image gradient wrt transformation#759

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rijobro wants to merge 64 commits intoSyneRBI:masterSyneRBI/SIRF:masterfrom rijobro:ImageGradWRTTransrijobro/SIRF:ImageGradWRTTransCopy head branch name to clipboard

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Commits

Commits on Jul 2, 2020

• implementation

  

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  4fee4ab

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• current progress

  

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• works

  

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• add converter

  

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• correct case

  

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• converter works

  

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• exported to python. tests pass

  

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  0d2137c

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• add adjoint test

  

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Commits on Jul 3, 2020

• remove bspline from deformation constructor

  

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• updated

  

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Commits on Jul 4, 2020

• c++ test works

  

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• create from cpp const

  

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• Merge branch 'add_fill_method_from_float_array' into BSpline2

  

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• Merge branch 'construct_from_geom_info_improvement' into BSpline2

  

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• Merge branch 'correct_check_dimensions' into BSpline2

  

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  e6eab54

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• python test passes

  

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Commits on Jul 6, 2020

• Merge remote-tracking branch 'SyneRBI/master' into BSpline2

  

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  2b72e67

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• codacy changes

  

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  ec8d6fb

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Commits on Jul 7, 2020

• Merge branch 'master' into BSpline2

  

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  c127e55

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• Merge remote-tracking branch 'SyneRBI/master' into BSpline2

  

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  64c0833

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• Merge branch 'master' into BSpline2

  

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• image gradient wrt transformation

  

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Commits on Jul 8, 2020

• Merge remote-tracking branch 'SyneRBI/master' into BSpline2

  

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  56b01cf

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• Merge branch 'BSpline2' into ImageGradWRTTrans

  

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Commits on Jul 9, 2020

• multiply tensor component by scalar image

  

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• add forward method

  

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• image grad wrt DEF TIMES IM

  

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  86a500e

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• use mean to compare images

  

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  d2f3e4d

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• give index access for separate values

  

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  ed1554b

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• add tensor maths with scalar image

  

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  564b427

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• update functionality

  

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• update testing

  

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• codacy

  

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Commits on Jul 10, 2020

• fill from image

  

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• correct /=

  

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• update sto_xyz/sto_ijk when cropping image

  

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• current attempt

  

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Commits on Jul 14, 2020

• Merge branch 'master' into BSpline2

  

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  58584c0

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• Merge branch 'BSpline2' into ImageGradWRTTrans

  

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  8faff7d

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• fix Reg python import

  

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  b8b4a8a

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• Merge branch 'BSpline2' into ImageGradWRTTrans

  

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Commits on Jul 17, 2020

• Merge branch 'no_install_niftymomo_headers' into BSpline2

  

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  16d4d20

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• Merge branch 'update_niftymomo' into BSpline2

  

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  c64a370

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• update to align with niftymomo

  

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  774e689

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• Merge branch 'BSpline2' into ImageGradWRTTrans

  

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  ce506d7

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• remove temp variable

  

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  33ddd20

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• Merge remote-tracking branch 'SyneRBI/master' into BSpline2

  

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  a66f26d

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• Merge branch 'update_niftymomo' into BSpline2

  

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  f85c7a5

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• Merge branch 'BSpline2' into ImageGradWRTTrans

  

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  97e3c4c

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• divide by spacing

  

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  bafd881

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• correct the test, only working for linear interpolation

  

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Commits on Jul 22, 2020

• python partially implemented

  

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• continue python implementation and test

  

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• finished

  

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• test everything

  

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• Merge remote-tracking branch 'SyneRBI/master' into ImageGradWRTTrans

  

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  f1c1d4e

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• undo comparison against image mean

  

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  fae6b20

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• registration attempt

  

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Commits on Jul 23, 2020

• Merge remote-tracking branch 'SyneRBI/master' into ImageGradWRTTrans

  

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  3c34b4c

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• Merge branch 'master' into ImageGradWRTTrans

  

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  f13a50a

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• grad wrt dvf specify all arguments

  

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  22b8c9c

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• debugging registration in image space

  

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  a029c2c

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• kernel convolution in python

  

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  89e2928

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• Merge branch 'python_kernel_convolution' into ImageGradWRTTrans

  

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