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Merge pull request #13 from Sage-Bionetworks/master
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kimyen authored Mar 15, 2019
2 parents 6528f0d + 84b28e3 commit 32a9505
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8 changes: 4 additions & 4 deletions DESCRIPTION
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Package: synapserutils
Type: Package
Title: Collection of utilities building on top of synapser
Version: 0.1.2
Date: 2018-04-10
Version: 0.1.5
Date: 2019-03-14
Authors@R: c(
person("Kimyen", "Ladia", role = c("aut", "cre"), email = "[email protected]"),
person("Sage Bionetworks", role = c("cph"))
Expand All @@ -14,8 +14,8 @@ Encoding: UTF-8
Imports: PythonEmbedInR (>= 0.2)
Depends: synapser (>= 0.2)
Suggests: testthat, knitr, rmarkdown
URL: https://www.sagebase.org
URL: https://www.synapse.org
BugReports: https://github.com/Sage-Bionetworks/synapserutils/issues
VignetteBuilder: knitr
Additional_repositories:
https://sage-bionetworks.github.io/ran
http://ran.synapse.org
6 changes: 3 additions & 3 deletions README.Rmd
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Expand Up @@ -21,11 +21,11 @@ The `synapserutils` package provides a set of utility functions, built on top of
`synapserutils` is available as a ready-built package for Microsoft Windows and Mac OSX. For Linux systems, it is available to install from source. It can be installed or upgraded using the standard `install.packages()` command, adding the [Sage Bionetworks R Archive Network (RAN)](https://sage-bionetworks.github.io/ran) to the repository list, e.g.:

```{r eval=F}
install.packages("synapserutils", repos=c("https://sage-bionetworks.github.io/ran", "http://cran.fhcrc.org"))
install.packages("synapserutils", repos=c("http://ran.synapse.org", "http://cran.fhcrc.org"))
```
Alternatively, edit your `~/.Rprofile` and configure your default repositories:
```{r eval=F}
options(repos=c("https://sage-bionetworks.github.io/ran", "http://cran.fhcrc.org"))
options(repos=c("http://ran.synapse.org", "http://cran.fhcrc.org"))
```
after which you may run `install.packages` without specifying the repositories:
```{r eval=F}
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If you have been asked to validate a release candidate, please replace the URL https://sage-bionetworks.github.io/ran with https://sage-bionetworks.github.io/staging-ran, that is:

```{r eval=F}
install.packages("synapserutils", repos=c("https://sage-bionetworks.github.io/staging-ran", "http://cran.fhcrc.org"))
install.packages("synapserutils", repos=c("http://staging-ran.synapse.org", "http://cran.fhcrc.org"))
```

## Usage
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