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Add warning for pennbbl Docker image #870

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merged 1 commit into from
Nov 13, 2024
Merged

Add warning for pennbbl Docker image #870

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26 changes: 26 additions & 0 deletions qsiprep/cli/run.py
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Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,7 @@
def main():
"""Entry point."""
import gc
import os
import sys
from multiprocessing import Manager, Process
from os import EX_SOFTWARE
Expand All @@ -41,6 +42,31 @@ def main():

parse_args()

# Raise a warning about PennBBL/QSIPrep being deprecated
in_container = False
# Check for Docker
if os.path.exists("/.dockerenv"):
in_container = True

# Check for Apptainer/Singularity
if os.path.exists("/.singularity.d") or os.path.exists("/.apptainer.d"):
in_container = True

# Check for environment variables
if os.getenv("SINGULARITY_NAME") or os.getenv("APPTAINER_NAME"):
in_container = True

if in_container:
print(
"""\
**************************************************************
WARNING: The pennbbl/qsiprep Docker image has been DEPRECATED.
Please use the pennlinc/qsiprep image instead.
**************************************************************
""",
file=sys.stderr,
)

if "pdb" in config.execution.debug:
from qsiprep.utils.debug import setup_exceptionhook

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