Release 2.5.0/ Update ExternalResources to HERD

[mavaylon1]

Prepare for release of PyNWB [2.5.0]

Before merging:

• Major and minor releases: Update package versions in requirements.txt, requirements-dev.txt,
  requirements-doc.txt, requirements-min.txt, environment-ros3.yml, and setup.py as needed.
• Check legal file dates and information in Legal.txt, license.txt, README.rst, docs/source/conf.py,
  and any other locations as needed
• Update setup.py as needed
• Update README.rst as needed
• Update src/pynwb/nwb-schema submodule as needed. Check the version number and commit SHA manually
• Update changelog (set release date) in CHANGELOG.md and any other docs as needed
• Run tests locally including gallery, validation, and streaming tests, and inspect all warnings and outputs
  (python test.py -v -p -i -b -w -r > out.txt 2>&1)
• Test docs locally (make clean, make html)
• Push changes to this PR and make sure all PRs to be included in this release have been merged
• Check that the readthedocs build for this PR succeeds (build latest to pull the new branch, then activate and
  build docs for new branch): https://readthedocs.org/projects/pynwb/builds/

Motivation

What was the reasoning behind this change? Please explain the changes briefly.
This is to update pynwb with the name update for ExternalResources in HDMF and hdmf-common-schema.

How to test the behavior?

Show how to reproduce the new behavior (can be a bug fix or a new feature)

Run the unit tests

Checklist

• Did you update CHANGELOG.md with your changes?
• Have you checked our Contributing document?
• Have you ensured the PR clearly describes the problem and the solution?
• Is your contribution compliant with our coding style? This can be checked running flake8 from the source directory.
• Have you checked to ensure that there aren't other open Pull Requests for the same change?
• Have you included the relevant issue number using "Fix #XXX" notation where XXX is the issue number? By including "Fix #XXX" you allow GitHub to close issue #XXX when the PR is merged.

[mavaylon1]

@oruebel Should we do a minor release for HDMF for this PR or wait till the first stage of Termset is done and merged.

[bendichter]

Could we move this along? Having the dev branches out of sync between HDMF and PyNWB makes it difficult to develop new features. In the future, would it be possible to prepare these branches at the same time and merge them at more or less the same time?

[mavaylon1]

Could we move this along? Having the dev branches out of sync between HDMF and PyNWB makes it difficult to develop new features. In the future, would it be possible to prepare these branches at the same time and merge them together?

The plan is to do a release this week. It took time to get a review for certain merges in HDMF. My hope is that all the merges can get in today on the HDMF side so I can do a release. Then tomorrow I'll do a fix on the hdmf version here.

[oruebel]

would it be possible to prepare these branches at the same time and merge them at more or less the same time?

Getting things to match exactly is tricky, but I agree, we'll try to merge these kind of interdependent PRs in a closer order in the future. This one was in part my fault for being to quick with approvals.

[codecov]

Codecov Report

Merging #1754 (3ae0fbe) into dev (8eb9a36) will not change coverage.
The diff coverage is 100.00%.

@@           Coverage Diff           @@
##              dev    #1754   +/-   ##
=======================================
  Coverage   91.98%   91.98%           
=======================================
  Files          27       27           
  Lines        2608     2608           
  Branches      681      681           
=======================================
  Hits         2399     2399           
  Misses        134      134           
  Partials       75       75           

Flag	Coverage Δ
integration	71.24% <50.00%> (ø)
unit	83.66% <100.00%> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Changed	Coverage Δ
src/pynwb/__init__.py	78.48% <100.00%> (ø)
src/pynwb/file.py	88.88% <100.00%> (ø)
src/pynwb/resources.py	100.00% <100.00%> (ø)

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