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Add point distance (3x) #62

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10 changes: 10 additions & 0 deletions src/templates/vibso_classes.tsv
Original file line number Diff line number Diff line change
Expand Up @@ -21,3 +21,13 @@ example:objective_magnification_factor_setting_for_RamanSpectrometerX rdf:type o
obo:VIBSO_0000015 spectral window range maximum acquisition band maximum https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/31 A data item that is the part of a Raman spectrum which represents the maximum wavenumber included in the spectrum and which is calculated from the windows size and window center. owl:Class data item|('part of' some 'Raman spectrum') ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519 210 cm^-1 It needs to be determined, if this is also part of another kind of spectrum, such as a vibrational spectrum in general. We also need to decide, if we need to also model the terms window size and window center, from which this term is derived.
obo:VIBSO_0000016 spectral window range minimum acquisition band minimum https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/31 A data item that is the part of a Raman spectrum which represents the minimum wavenumber included in the spectrum and which is calculated from the windows size and window center. owl:Class data item|('part of' some 'Raman spectrum') ORCID:0000-0002-1595-3213|ORCID:0000-0001-7694-5519 1960 cm^-1 It needs to be determined, if this is also part of another kind of spectrum, such as a vibrational spectrum in general. We also need to decide, if we need to also model the terms window size and window center, from which this term is derived.
obo:VIBSO_0000017 incident light power datum excitation light power; light power on the sample https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/29 A scalar measurement datum that is the result of measuring the incoming light power before the sample holder and which depends on the laser power and on the dispersive behaviour of the filters and optical components. owl:Class scalar measurement datum ORCID:0000-0001-7694-5519 200 mW The incident power is an elementary measurement parameter allowing to compare among measurements conducted with the same setup. A thorough investigation of the effects of light irradiation onto the sample depends on the local irradiance (power per unit area) and requires deeper knowledge of the irradiation geometry, e.g. width, depth and shape of the focal spot.
obo:tbd Region of interest ROI https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 User-defined portion of the image area in which data will be acquired. The remainder of the image area will be discarded. https://wiki.charisma.ideaconsult.net/wiki/Item:Q57 owl:Class
obo:tbd ROI width in the X direction width https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 Size = (number of points) * (point distance)
obo:tbd ROI width in the Y direction length https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 Size = (number of points) * (point distance)
obo:tbd ROI width in the Z direction depth https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 Size = (number of points) * (point distance)
obo:tbd number of points in the X direction number of points per line https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 Number of points = size / (point distance)
obo:tbd number of points in the Y direction number of lines per layer https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 Number of points = size / (point distance)
obo:tbd number of points in the Z direction number of layers per acquisition https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 Number of points = size / (point distance)
obo:tbd point distance X sampling pace; sampling step; sampling distance; voxel distance https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 The distance between two adjacent measurement points in the X direction. Not to be confused with the voxel size (resolution). It can be compared with the minimum resolvable distance as defined by the Abbe's criterion. owl:Class ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 5 µm/point Point distance = size / (number of points)
obo:tbd point distance Y sampling pace; sampling step; sampling distance; voxel distance https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 The distance between two adjacent measurement points in the Y direction. Not to be confused with the voxel size (resolution). It can be compared with the minimum resolvable distance as defined by the Abbe's criterion. owl:Class ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 500 nm/point Point distance = size / (number of points)
obo:tbd point distance Z sampling pace; sampling step; sampling distance; voxel distance https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 The distance between two adjacent measurement points in the Z direction. Not to be confused with the voxel size (resolution). It can be compared with the minimum resolvable distance as defined by the Abbe's criterion. owl:Class ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 50 nm/point Point distance = size / (number of points)