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updates from ufs-community #7

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JessicaMeixner-NOAA
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MinsukJi-NOAA and others added 4 commits January 21, 2020 16:30
* Add debug compilation flag specification at top level

1. Debug flags are specified in coupledFV3_MOM6_CICE_debug.appBuilder

2. Flags are used by NEMS MOM6 and CICE submodules to initiate debug makes
Updates FV3 and stochastic_physics submodules to match current ufs-weather model (b41e023) from 01-10-2020.

Updates conf,modulefiles,parm and compsets.
 FV3 is updated to include the following:
* fv3atm issue #37: fix the real(8) lat/lon in netcdf file
* fv3atm #35: Reducing background vertical diffusivities in the inversion layers
* fv3atm #24: bug in gfsphysics/physics/moninedmf_hafs.f
* fv3atm #18: Optimize netcdf write component and bugfix for post and samfdeepcnv.f
* set (0-1) bounds for ficein_cpl
* remove cache_size due to lower netcdf verion 4.5.1 on mars
* Change ice falling to 0.9 in gfsphysics/physics/gfdl_cloud_microphys.F90

NEMS is updated to remove ice-ocean merge in prep_atm:
* The following fields are now exported to FV3 as ice-only fields:
 mean_sensi_heat_flx
 mean_laten_heat_flx
 mean_up_lw_flx
 mean_evap_rate
 mean_zonal_moment_flx
 mean_merid_moment_flx

MOM6 is updated to GFDL's 20200108 dev/master:
* MOM6 adds field in MOM.res_1.nc (kg_m3_to_R). All other files are reproducible with previous baseline
The following two new compsets will be added to the ufs-s2s-model regression test system:
1. FV3 using 2 threads
2. FV3 using a different decomposition layout

The number of PETs used in each of the existing compsets will also be revised.
Close #22
@JessicaMeixner-NOAA JessicaMeixner-NOAA merged commit a5d326d into JessicaMeixner-NOAA:develop Feb 3, 2020
@JessicaMeixner-NOAA JessicaMeixner-NOAA changed the title updates from bfs-community updates from ufs-community Feb 3, 2020
JessicaMeixner-NOAA pushed a commit that referenced this pull request Apr 23, 2020
Add debug compilation flag specification at top level (ufs-community#17)
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4 participants