CircusCircos

Scripts and singularity collection for running the Circos diagram tool

Dependencies

Requires singularity, should work on most linux computers

usage

Download the singularity collection

singularity pull --name circus.simg shub://J35P312/CircusCircos

The collection contains all dependencies for running circos. Download circos:

wget http://circos.ca/distribution/circos-0.69-6.tgz	
tar -xvf circos-0.69-6.tgz

Run the example

cd circos-0.69-6/example/

singularity exec ../../circus.simg perl run

Create your own circos configs, and run in a similar fasion. Remember to only use relative path within your circos config, otherwise, singularity will resolve within the container.