Validates the MUSICA meta data against the CCPP standard names

.gitignore

@@ -0,0 +1,7 @@
+**/*.DS_Store
+**/*.pyc
+**/build/
+**/CMakeCache.txt
+**/CMakeFiles/
+.vscode
+xcode/

doc/NamesNotInDictionary.txt

@@ -1,7 +1,7 @@
 
 #######################
 Date/time of when script was run:
-2024-10-10 14:17:36.423628
+2024-11-12 13:30:15.231161
 #######################
 
 Non-dictionary standard names found in the following metadata files:
@@ -12,8 +12,10 @@ atmospheric_physics/schemes/sima_diagnostics/sima_state_diagnostics.meta
 
     - air_pressure_at_interface
     - air_pressure_of_dry_air_at_interface
+    - geopotential_height_wrt_surface_at_interface
     - ln_air_pressure_at_interface
     - ln_air_pressure_of_dry_air_at_interface
+    - surface_air_pressure
 
 --------------------------
 
@@ -45,65 +47,49 @@ atmospheric_physics/schemes/sima_diagnostics/tropopause_diagnostics.meta
 
 --------------------------
 
-atmospheric_physics/schemes/dry_adiabatic_adjust/dadadj.meta
+atmospheric_physics/schemes/tj2016/tj2016_precip.meta
 
-    - air_pressure_at_interface
-    - binary_indicator_for_dry_adiabatic_adjusted_grid_cell
-    - number_of_iterations_for_dry_adiabatic_adjustment_algorithm_convergence
-    - number_of_vertical_levels_from_model_top_where_dry_adiabatic_adjustment_occurs
-    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water
+    - gas_constant_of_water_vapor
+    - lwe_large_scale_precipitation_rate_at_surface
+    - ratio_of_water_vapor_to_dry_air_molecular_weights
+    - sum_of_sigma_pressure_hybrid_coordinate_a_coefficient_and_sigma_pressure_hybrid_coordinate_b_coefficient
 
 --------------------------
 
-atmospheric_physics/schemes/dry_adiabatic_adjust/dadadj_apply_qv_tendency.meta
+atmospheric_physics/schemes/tj2016/tj2016_sfc_pbl_hs.meta
 
-    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water
+    - air_pressure_at_interface
+    - eddy_heat_diffusivity
+    - eddy_momentum_diffusivity
+    - gas_constant_of_water_vapor
+    - ln_air_pressure_at_interface
+    - pi_constant
+    - ratio_of_water_vapor_to_dry_air_molecular_weights
+    - sum_of_sigma_pressure_hybrid_coordinate_a_coefficient_and_sigma_pressure_hybrid_coordinate_b_coefficient
+    - surface_air_pressure
+    - surface_eastward_wind_stress
+    - surface_evaporation_rate
+    - surface_northward_wind_stress
+    - surface_upward_sensible_heat_flux
+    - tendency_of_air_temperature_due_to_diabatic_heating
+    - tendency_of_air_temperature_due_to_vertical_diffusion
+    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water_due_to_vertical_diffusion
 
 --------------------------
 
-atmospheric_physics/schemes/utilities/geopotential_temp.meta
+atmospheric_physics/schemes/dry_adiabatic_adjust/dadadj.meta
 
     - air_pressure_at_interface
-    - ln_air_pressure_at_interface
+    - binary_indicator_for_dry_adiabatic_adjusted_grid_cell
+    - number_of_iterations_for_dry_adiabatic_adjustment_algorithm_convergence
+    - number_of_vertical_levels_from_model_top_where_dry_adiabatic_adjustment_occurs
+    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water
 
 --------------------------
 
-atmospheric_physics/schemes/tropopause_find/tropopause_find.meta
+atmospheric_physics/schemes/dry_adiabatic_adjust/dadadj_apply_qv_tendency.meta
 
-    - air_pressure_at_interface
-    - fill_value_for_diagnostic_output
-    - fractional_calendar_days_on_end_of_current_timestep
-    - pi_constant
-    - ratio_of_dry_air_gas_constant_to_specific_heat_of_dry_air_at_constant_pressure
-    - tropopause_air_pressure
-    - tropopause_air_pressure_from_chemical_method
-    - tropopause_air_pressure_from_climatological_method
-    - tropopause_air_pressure_from_climatology_dataset
-    - tropopause_air_pressure_from_cold_point_method
-    - tropopause_air_pressure_from_hybrid_stobie_linoz_with_climatological_backup_method
-    - tropopause_air_pressure_from_lapse_rate_method
-    - tropopause_air_temperature
-    - tropopause_air_temperature_from_chemical_method
-    - tropopause_air_temperature_from_climatological_method
-    - tropopause_air_temperature_from_cold_point_method
-    - tropopause_air_temperature_from_hybrid_stobie_linoz_with_climatological_backup_method
-    - tropopause_air_temperature_from_lapse_rate_method
-    - tropopause_calendar_days_from_climatology
-    - tropopause_geopotential_height_wrt_surface
-    - tropopause_geopotential_height_wrt_surface_from_chemical_method
-    - tropopause_geopotential_height_wrt_surface_from_climatological_method
-    - tropopause_geopotential_height_wrt_surface_from_cold_point_method
-    - tropopause_geopotential_height_wrt_surface_from_hybrid_stobie_linoz_with_climatological_backup_method
-    - tropopause_geopotential_height_wrt_surface_from_lapse_rate_method
-    - tropopause_vertical_layer_index
-    - tropopause_vertical_layer_index_from_chemical_method
-    - tropopause_vertical_layer_index_from_climatological_method
-    - tropopause_vertical_layer_index_from_cold_point_method
-    - tropopause_vertical_layer_index_from_hybrid_stobie_linoz_with_climatological_backup_method
-    - tropopause_vertical_layer_index_from_hybrid_stobie_linoz_with_climatological_backup_method_for_chemistry
-    - tropopause_vertical_layer_index_from_lapse_rate_method
-    - vertical_layer_index_lower_bound_from_hybrid_stobie_linoz_with_climatological_backup_method_for_linearized_ozone_chemistry
-    - vertical_layer_index_lower_bound_from_hybrid_stobie_linoz_with_climatological_backup_method_for_stratospheric_chemistry
+    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water
 
 --------------------------
 
@@ -134,6 +120,32 @@ atmospheric_physics/schemes/zhang_mcfarlane/zm_conv_momtran.meta
 
 --------------------------
 
+atmospheric_physics/schemes/zhang_mcfarlane/zm_conv_evap.meta
+
+    - 
+    - cloud_area_fraction
+    - flag_for_zhang_mcfarlane_convective_organization_parameterization?
+    - freezing_point_of_water?
+    - frozen_precipitation_mass_flux_at_interface_due_to_deep_convection?
+    - heating_rate
+    - latent_heat_of_fusion_of_water_at_0c?
+    - latent_heat_of_vaporization_of_water_at_0c?
+    - lwe_frozen_precipitation_rate_at_surface_due_to_deep_convection
+    - lwe_precipitation_rate_at_surface_due_to_deep_convection
+    - precipitation_mass_flux_at_interface_due_to_deep_convection?
+    - pressure_thickness
+    - specific_heat_of_dry_air_at_constant_pressure?
+    - tendency_of_dry_air_enthalpy_at_constant_pressure_due_to_frozen_precipitation_melt?
+    - tendency_of_dry_air_enthalpy_at_constant_pressure_due_to_frozen_precipitation_production_in_deep_convection?
+    - tendency_of_frozen_precipitation_wrt_moist_air_and_condensed_water_due_to_deep_convection?
+    - tendency_of_precipitation_wrt_moist_air_and_condensed_water_due_to_deep_convection?
+    - tendency_of_precipitation_wrt_moist_air_and_condensed_water_due_to_deep_convection_excluding_subcloud_evaporation
+    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air and_condensed_water?
+    - tunable_evaporation_efficiency_for_land_in_zhang_mcfarlane_deep_convection_scheme?
+    - tunable_evaporation_efficiency_in_zhang_mcfarlane_deep_convection_scheme?
+
+--------------------------
+
 atmospheric_physics/schemes/zhang_mcfarlane/zm_convr.meta
 
     - air_pressure_at_interface
@@ -162,6 +174,7 @@ atmospheric_physics/schemes/zhang_mcfarlane/zm_convr.meta
     - flag_for_no_deep_convection_in_pbl?
     - freezing_point_of_water?
     - gas_constant_of_water_vapor?
+    - geopotential_height_wrt_surface_at_interface
     - horizontal_index_of_convective_columns_for_deep_convection_for_convective_columns
     - in_cloud_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water_due_to_deep_convection
     - initial_parcel_property_as_function_of_well-mixed_pbl_for_zhang_mcfarlane?
@@ -212,57 +225,64 @@ atmospheric_physics/schemes/zhang_mcfarlane/zm_conv_convtran.meta
 
 --------------------------
 
-atmospheric_physics/schemes/zhang_mcfarlane/zm_conv_evap.meta
+atmospheric_physics/schemes/utilities/geopotential_temp.meta
 
-    - 
-    - cloud_area_fraction
-    - flag_for_zhang_mcfarlane_convective_organization_parameterization?
-    - freezing_point_of_water?
-    - frozen_precipitation_mass_flux_at_interface_due_to_deep_convection?
-    - heating_rate
-    - latent_heat_of_fusion_of_water_at_0c?
-    - latent_heat_of_vaporization_of_water_at_0c?
-    - lwe_frozen_precipitation_rate_at_surface_due_to_deep_convection
-    - lwe_precipitation_rate_at_surface_due_to_deep_convection
-    - precipitation_mass_flux_at_interface_due_to_deep_convection?
-    - pressure_thickness
-    - specific_heat_of_dry_air_at_constant_pressure?
-    - tendency_of_dry_air_enthalpy_at_constant_pressure_due_to_frozen_precipitation_melt?
-    - tendency_of_dry_air_enthalpy_at_constant_pressure_due_to_frozen_precipitation_production_in_deep_convection?
-    - tendency_of_frozen_precipitation_wrt_moist_air_and_condensed_water_due_to_deep_convection?
-    - tendency_of_precipitation_wrt_moist_air_and_condensed_water_due_to_deep_convection?
-    - tendency_of_precipitation_wrt_moist_air_and_condensed_water_due_to_deep_convection_excluding_subcloud_evaporation
-    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air and_condensed_water?
-    - tunable_evaporation_efficiency_for_land_in_zhang_mcfarlane_deep_convection_scheme?
-    - tunable_evaporation_efficiency_in_zhang_mcfarlane_deep_convection_scheme?
+    - air_pressure_at_interface
+    - geopotential_height_wrt_surface_at_interface
+    - ln_air_pressure_at_interface
 
 --------------------------
 
-atmospheric_physics/schemes/tj2016/tj2016_precip.meta
+atmospheric_physics/schemes/tropopause_find/tropopause_find.meta
 
-    - gas_constant_of_water_vapor
-    - lwe_large_scale_precipitation_rate_at_surface
-    - ratio_of_water_vapor_to_dry_air_molecular_weights
-    - sum_of_sigma_pressure_hybrid_coordinate_a_coefficient_and_sigma_pressure_hybrid_coordinate_b_coefficient
+    - air_pressure_at_interface
+    - fill_value_for_diagnostic_output
+    - fractional_calendar_days_on_end_of_current_timestep
+    - geopotential_height_wrt_surface_at_interface
+    - pi_constant
+    - ratio_of_dry_air_gas_constant_to_specific_heat_of_dry_air_at_constant_pressure
+    - tropopause_air_pressure
+    - tropopause_air_pressure_from_chemical_method
+    - tropopause_air_pressure_from_climatological_method
+    - tropopause_air_pressure_from_climatology_dataset
+    - tropopause_air_pressure_from_cold_point_method
+    - tropopause_air_pressure_from_hybrid_stobie_linoz_with_climatological_backup_method
+    - tropopause_air_pressure_from_lapse_rate_method
+    - tropopause_air_temperature
+    - tropopause_air_temperature_from_chemical_method
+    - tropopause_air_temperature_from_climatological_method
+    - tropopause_air_temperature_from_cold_point_method
+    - tropopause_air_temperature_from_hybrid_stobie_linoz_with_climatological_backup_method
+    - tropopause_air_temperature_from_lapse_rate_method
+    - tropopause_calendar_days_from_climatology
+    - tropopause_geopotential_height_wrt_surface
+    - tropopause_geopotential_height_wrt_surface_from_chemical_method
+    - tropopause_geopotential_height_wrt_surface_from_climatological_method
+    - tropopause_geopotential_height_wrt_surface_from_cold_point_method
+    - tropopause_geopotential_height_wrt_surface_from_hybrid_stobie_linoz_with_climatological_backup_method
+    - tropopause_geopotential_height_wrt_surface_from_lapse_rate_method
+    - tropopause_vertical_layer_index
+    - tropopause_vertical_layer_index_from_chemical_method
+    - tropopause_vertical_layer_index_from_climatological_method
+    - tropopause_vertical_layer_index_from_cold_point_method
+    - tropopause_vertical_layer_index_from_hybrid_stobie_linoz_with_climatological_backup_method
+    - tropopause_vertical_layer_index_from_hybrid_stobie_linoz_with_climatological_backup_method_for_chemistry
+    - tropopause_vertical_layer_index_from_lapse_rate_method
+    - vertical_layer_index_lower_bound_from_hybrid_stobie_linoz_with_climatological_backup_method_for_linearized_ozone_chemistry
+    - vertical_layer_index_lower_bound_from_hybrid_stobie_linoz_with_climatological_backup_method_for_stratospheric_chemistry
 
 --------------------------
 
-atmospheric_physics/schemes/tj2016/tj2016_sfc_pbl_hs.meta
-
-    - air_pressure_at_interface
-    - eddy_heat_diffusivity
-    - eddy_momentum_diffusivity
-    - gas_constant_of_water_vapor
-    - ln_air_pressure_at_interface
-    - pi_constant
-    - ratio_of_water_vapor_to_dry_air_molecular_weights
-    - sum_of_sigma_pressure_hybrid_coordinate_a_coefficient_and_sigma_pressure_hybrid_coordinate_b_coefficient
-    - surface_eastward_wind_stress
-    - surface_evaporation_rate
-    - surface_northward_wind_stress
-    - surface_upward_sensible_heat_flux
-    - tendency_of_air_temperature_due_to_diabatic_heating
-    - tendency_of_air_temperature_due_to_vertical_diffusion
-    - tendency_of_water_vapor_mixing_ratio_wrt_moist_air_and_condensed_water_due_to_vertical_diffusion
+atmospheric_physics/schemes/musica/musica_ccpp.meta
+
+    - blackbody_temperature_at_surface
+    - dynamic_constituents_for_musica_ccpp
+    - extraterrestrial_radiation_flux
+    - geopotential_height_wrt_surface_at_interface
+    - micm_solver_type
+    - number_of_grid_cells
+    - number_of_photolysis_wavelength_grid_sections
+    - photolysis_wavelength_grid_interfaces
+    - surface_albedo_due_to_UV_and_VIS_direct
 
 #######################

test/musica/micm/configs/chapman/config.json → schemes/musica/configurations/chapman/micm/config.json

@@ -3,4 +3,4 @@
     "species.json",
     "reactions.json"
   ]
-}
+}