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Update terminology associated with remaining custom metadata.
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54 changes: 27 additions & 27 deletions
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db/seeds/008_miappe_custom_metadata.seeds.rb → ...eds/008_miappe_extended_metadata.seeds.rb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,40 +1,40 @@ | ||
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| unless ExtendedMetadataType.where(title:'MIAPPE metadata v1.1', supported_type:'Investigation').any? | ||
| cmt = ExtendedMetadataType.new(title: 'MIAPPE metadata v1.1', supported_type:'Investigation') | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'id', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'submission_date', sample_attribute_type: SampleAttributeType.where(title:'Date').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'license', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'miappe_version', required:true, sample_attribute_type: SampleAttributeType.where(title:'Integer').first) | ||
| cmt.save! | ||
| emt = ExtendedMetadataType.new(title: 'MIAPPE metadata v1.1', supported_type:'Investigation') | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'id', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'submission_date', sample_attribute_type: SampleAttributeType.where(title:'Date').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'license', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'miappe_version', required:true, sample_attribute_type: SampleAttributeType.where(title:'Integer').first) | ||
| emt.save! | ||
| puts 'Seeded Investigation extended metadata for MIAPPE v1.1' | ||
| end | ||
|
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| unless ExtendedMetadataType.where(title:'MIAPPE metadata v1.1', supported_type:'Study').any? | ||
| cmt = ExtendedMetadataType.new(title: 'MIAPPE metadata v1.1', supported_type:'Study') | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'id', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'study_start_date', required:true, sample_attribute_type: SampleAttributeType.where(title:'Date').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'study_end_date', sample_attribute_type: SampleAttributeType.where(title:'Date').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'contact_institution', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'geographic_location_country', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'experimental_site_name', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'latitude', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'longitude', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'altitude', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'description_of_the_experimental_design', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'type_of_experimental_design', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'observation_unit_level_hierarchy', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'observation_unit_description', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'description_of_growth_facility', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'type_of_growth_facility', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'cultural_practices', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt = ExtendedMetadataType.new(title: 'MIAPPE metadata v1.1', supported_type:'Study') | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'id', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'study_start_date', required:true, sample_attribute_type: SampleAttributeType.where(title:'Date').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'study_end_date', sample_attribute_type: SampleAttributeType.where(title:'Date').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'contact_institution', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'geographic_location_country', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'experimental_site_name', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'latitude', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'longitude', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'altitude', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'description_of_the_experimental_design', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'type_of_experimental_design', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'observation_unit_level_hierarchy', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'observation_unit_description', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'description_of_growth_facility', required:true, sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'type_of_growth_facility', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'cultural_practices', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
|
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| cmt.save! | ||
| emt.save! | ||
| puts 'Seeded Study extended metadata for MIAPPE v1.1' | ||
| end | ||
|
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| unless ExtendedMetadataType.where(title:'MIAPPE metadata v1.1', supported_type:'Assay').any? | ||
| cmt = ExtendedMetadataType.new(title: 'MIAPPE metadata v1.1', supported_type: 'Assay') | ||
| cmt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'level', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| cmt.save! | ||
| emt = ExtendedMetadataType.new(title: 'MIAPPE metadata v1.1', supported_type: 'Assay') | ||
| emt.extended_metadata_attributes << ExtendedMetadataAttribute.new(title: 'level', sample_attribute_type: SampleAttributeType.where(title:'String').first) | ||
| emt.save! | ||
| puts 'Seeded Assay extended metadata for MIAPPE v1.1' | ||
| end |