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ConesaLab - Genomics of gene expression

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  1. SQANTI3 SQANTI3 Public

    Tool for the Quality Control of Long-Read Defined Transcriptomes

    HTML 205 51

  2. MultiPower MultiPower Public

    Statistical power studies for multi-omics experiments.

    R 30 10

  3. tappAS tappAS Public

    This repository contains the source code for the tappAS application. See README for details.

    Java 16 3

  4. acorde acorde Public

    Isoform co-usage networks from single-cell RNA-seq data

    HTML 15 4

  5. TCR_nextflow TCR_nextflow Public

    Nextflow 12 2

  6. SQANTI SQANTI Public

    Python 10 3

Repositories

Showing 10 of 27 repositories
  • IsoAnnot Public
    ConesaLab/IsoAnnot’s past year of commit activity
    Python 5 0 0 0 Updated Feb 8, 2025
  • SQANTI3 Public

    Tool for the Quality Control of Long-Read Defined Transcriptomes

    ConesaLab/SQANTI3’s past year of commit activity
    HTML 205 GPL-3.0 51 22 1 Updated Feb 6, 2025
  • Github-stats-saver Public

    Scripts to store downloads or otherwise relevant metrics of a program from different repositories

    ConesaLab/Github-stats-saver’s past year of commit activity
    Python 2 GPL-3.0 1 0 0 Updated Feb 5, 2025
  • SQANTI_reads_ComputationalEfficiency_plots Public

    Storage of scripts to reproduce the computational efficiency evaluation in Keil, Monzó, McIntyre, Conesa. 2025. SQANTI-reads

    ConesaLab/SQANTI_reads_ComputationalEfficiency_plots’s past year of commit activity
    Shell 0 0 0 0 Updated Jan 31, 2025
  • MultiPower Public

    Statistical power studies for multi-omics experiments.

    ConesaLab/MultiPower’s past year of commit activity
    R 30 10 4 0 Updated Jan 18, 2025
  • MOSim Public

    Bulk and single-cell Multi-Omics ground truth Simulator in R

    ConesaLab/MOSim’s past year of commit activity
    R 9 1 1 0 Updated Dec 15, 2024
  • beanTFBSs Public
    ConesaLab/beanTFBSs’s past year of commit activity
    Python 0 0 0 0 Updated Oct 28, 2024
  • paintomics4 Public
    ConesaLab/paintomics4’s past year of commit activity
    JavaScript 7 GPL-3.0 0 0 1 Updated May 14, 2024
  • SQANTI-SIM Public

    A simulator of controlled transcript novelty for lrRNA-seq benchmark

    ConesaLab/SQANTI-SIM’s past year of commit activity
    HTML 7 GPL-3.0 1 1 0 Updated Apr 29, 2024
  • Coxmos Public

    Survival Analyses for High Dimensional Data

    ConesaLab/Coxmos’s past year of commit activity
    HTML 2 CC-BY-4.0 0 0 0 Updated Mar 10, 2024
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