Skip to content

Commit

Permalink
remove superfluous TreeScaler connector which just generates warning …
Browse files Browse the repository at this point in the history
…messages at the moment #35
  • Loading branch information
rbouckaert committed Dec 13, 2022
1 parent bff0c23 commit c417ca1
Showing 1 changed file with 3 additions and 0 deletions.
3 changes: 3 additions & 0 deletions fxtemplates/Standard.xml
Original file line number Diff line number Diff line change
Expand Up @@ -408,7 +408,10 @@ ClusterTree/clusterType/,

<connect srcID='allTipDatesRandomWalker.t:$(n)' targetID='mcmc' inputName='operator' if='inposterior(Tree.t:$(n)) and Tree.t:$(n)/estimate=true and allTipDatesRandomWalker.t:$(n)/weight!=0.0'>Estimates tip dates for tree t:$(n)</connect>

<!--
TreeScaler is replaced with more efficient BICESPS operators.
<connect srcID="YuleModelTreeScaler.t:$(n)" targetID="mcmc" inputName="operator" if="inposterior(YuleModel.t:$(n)) and Tree.t:$(n)/estimate=true" >Scales all internal nodes for tree t:$(n)</connect>
-->
<connect srcID="YuleModelTreeRootScaler.t:$(n)" targetID="mcmc" inputName="operator" if="inposterior(YuleModel.t:$(n)) and Tree.t:$(n)/estimate=true" >Scales root node for tree t:$(n)</connect>
<connect srcID="YuleModelUniformOperator.t:$(n)" targetID="mcmc" inputName="operator" if="inposterior(YuleModel.t:$(n)) and Tree.t:$(n)/estimate=true" >Draws new internal node heights uniformally for tree t:$(n)</connect>
<connect srcID="YuleModelSubtreeSlide.t:$(n)" targetID="mcmc" inputName="operator" if="inposterior(YuleModel.t:$(n)) and Tree.t:$(n)/estimate=true" >Performs subtree slide rearrangement of tree t:$(n)</connect>
Expand Down

0 comments on commit c417ca1

Please sign in to comment.