DIG-1533: cancer_type->primary_site & DIG-1583: Implement censoring on aggregate count threshold #40
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SonQBChau
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Best tested from CanDIGv2's
feature/censoring-and-rename-cancer-typebranchDescription
Includes #37 because it is required to handle the new version of Katsu
This both handles data censoring on discovery queries for low counts, and renaming cancer_type to primary_site.
To test:
curl candig.docker.internal:5080/query/discovery/programs -H "Authorization: Bearer $TOKEN"curl candig.docker.internal:5080/query/genomic_completeness -H "Authorization: Bearer $TOKEN"curl candig.docker.internal:5080/query/discovery/query -H "Authorization: Bearer $TOKEN"