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rename var
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hector-baez committed Nov 19, 2023
1 parent 616f869 commit e3f6329
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion tronko/assign/deduplicate_asv.py
Original file line number Diff line number Diff line change
Expand Up @@ -129,7 +129,7 @@ def rewrite_files(seq_dict, dir, projectid, primer, suffix="paired_F", isPaired=
seq=f"{line.strip()}"
if id in seq_dict.keys():
out.write(f">{id}\n")
out_f.write(f"{seq}\n")
out.write(f"{seq}\n")
shutil.move(f"{fasta}_tmp", fasta)

# rewrite new asv files without duplicate sequences
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