dl primer info

CALeDNA · Feb 16, 2024 · 805b8d6 · 805b8d6
1 parent e0985b9
commit 805b8d6
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/tronko/assign/qc.sh b/tronko/assign/qc.sh
@@ -31,6 +31,9 @@ switchAWSCreds $S3_ACCESS_KEY_ID $S3_SECRET_ACCESS_KEY $S3_DEFAULT_REGION
 aws s3 sync s3://$S3_BUCKET/projects/$PROJECTID/samples $PROJECTID-$PRIMER/samples --no-progress --endpoint-url $S3_ENDPOINT
 
 
+# download primer info
+aws s3 sync s3://$S3_BUCKET/projects/$PROJECTID/QC $PROJECTID-$PRIMER/ --exclude "*/*" --no-progress --endpoint-url $S3_BUCKET
+
 # Set creds for js2 to download old QC if they exist
 switchAWSCreds $JS2_ACCESS_KEY_ID $JS2_SECRET_ACCESS_KEY $JS2_DEFAULT_REGION
 aws s3 sync s3://$JS2_BUCKET/projects/$PROJECTID/QC $PROJECTID-$PRIMER/ --exclude "*/*" --no-progress --endpoint-url $JS2_ENDPOINT