Replaced calls to Query.Clone() and Query.IClone() with calls to BH.Engine.Base.DeepClone()

[alelom]

NOTE: Depends on

BHoM/BHoM_Engine#2585

Issues addressed by this PR

Closes #187

Test files

Changelog

Additional comments

[bhombot-ci]

@alelom just to let you know, I have provided a check-installer result to this Pull Request as it was detected to be linked to other Pull Requests in a series. The comment which triggered this check came from @alelom on BHoM_Engine

[bhombot-ci]

@alelom just to let you know, I have provided a check-installer result to this Pull Request as it was detected to be linked to other Pull Requests in a series. The comment which triggered this check came from @alelom on BHoM_Engine

[bhombot-ci]

@alelom just to let you know, I have provided a check-versioning result to this Pull Request as it was detected to be linked to other Pull Requests in a series. The comment which triggered this check came from @alelom on BHoM_Engine

[bhombot-ci]

@alelom just to let you know, I have provided a check-versioning result to this Pull Request as it was detected to be linked to other Pull Requests in a series. The comment which triggered this check came from @FraserGreenroyd on BHoM_Engine

[bhombot-ci]

@alelom just to let you know, I have provided a check-versioning result to this Pull Request as it was detected to be linked to other Pull Requests in a series. The comment which triggered this check came from @FraserGreenroyd on BHoM_Engine

[FraserGreenroyd]

@BHoMBot check required
@BHoMBot check copyright-compliance
@BHoMBot check dataset-compliance

[bhombot-ci]

@FraserGreenroyd to confirm, the following checks are now queued:

• code-compliance
• documentation-compliance
• project-compliance
• core
• null-handling
• serialisation
• installer
• versioning
• copyright-compliance
• dataset-compliance

[bhombot-ci]

The check installer has already been run previously and recorded as a successful check. This check has not been run again at this time.

[bhombot-ci]

The check versioning has already been run previously and recorded as a successful check. This check has not been run again at this time.

[FraserGreenroyd]

Code reviewed in line with this PR

[FraserGreenroyd]

@BHoMBot check ready-to-merge

[bhombot-ci]

@FraserGreenroyd to confirm, the following checks are now queued:

• ready-to-merge