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Dev #388

Merged
merged 69 commits into from
May 24, 2024
Merged

Dev #388

merged 69 commits into from
May 24, 2024

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rcpeene
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@rcpeene rcpeene commented May 24, 2024

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sjara and others added 30 commits April 5, 2024 10:50
@sjara
Added notebook on behavioral state.
aea1953
@sjara
Fixed symlink.
efc4598
@sjara
Cleaned up draft.
28e7785
@rcpeene
replace all mentions of fsspec with remfile
bcb759f
@rcpeene
Fix links, reorg TOC, issue #374
7d55dd1
@rcpeene
Issue #374
71bca71
@rcpeene
Fix typo
85c5122
@rcpeene
Add conda usage instructions. issue #374
afe7289
@sjara
First full draft.
b92dbfb
@sjara
Fixed bold font.
0492e78
@sjara
Added sections after feedback from Daniel.
3b8187a
@stephprince
add small markdown edits
7d0be49
@stephprince
add markdown edits to visualization section
bdf65b9
@stephprince
fix broken links
4c3eacd
@stephprince
update lfp data shape descriptions
3db9a1f
@sjara
Cleaned up and added cell to install SSM if needed.
02aaa8a
@sjara
Merge branch 'AllenInstitute:main' into main
bea8e70
@sjara
Minor fix: removed "pass".
bd47811
@sjara
Minor fix: removed 'pass'.
e4d7529
@colleenjg
Added a missing import statement.
270fdfe
@colleenjg
Removed redundant line and made minor textual fixes.
a6ca1ae
@colleenjg
Minor textual changes.
171e9f9
@colleenjg
Removed comma.
4dd4bcc
@sjara
Updated other files with information about our contribution.
ce22bc4
@rcpeene
update nwbwidgets and pin ipywidgets
8fc1a59
@rcpeene
update python version in build
cd7e19e
@rcpeene
Merge pull request #381 from colleenjg/fix_cred_assign_figures_bug
c203d5b 
Added a missing import statement.
@rcpeene
Merge pull request #384 from AllenInstitute/colleen
0f78f3e 
Colleen
@rcpeene
quote version number so github test machine properly interprets version
532119e
@rcpeene
Merge pull request #383 from AllenInstitute/env
ed84486 
update nwbwidgets and pin ipywidgets
sjara and others added 25 commits May 21, 2024 09:43
@sjara
Moved Cython to requirements.txt
e515aa4
@sjara
Updated link in README.
c7eb874
@sjara
Merge branch 'jaramillo' into jaramillo-1
df37186
@sjara
Merge pull request #386 from sjara/jaramillo-1
9ff66f6 
Moved "cython" to requirements.txt in attempt to fix "ssm" import
@rcpeene
pull ssm from github (PyPI version causes bug)
be64bad
@rcpeene
Merge branch 'jaramillo' of https://github.com/AllenInstitute/opensco…
38ce7fd 
…pe_databook into jaramillo
@rcpeene
rerun nb
1a47898
@rcpeene
woops! readd critical '--nbmake' flag to test command
76697b0
@rcpeene
rerun nb
e09ec9b
@rcpeene
unitalicize authors, embolden role description
5fcc987
@rcpeene
use context manager to read contributors file. remove middle initial …
874d822 
…from author name
@rcpeene
explain alternative roi_mask definition
dbf90aa
@rcpeene
Address scientific review for visualization. issue #379
6f6538e
@rcpeene
fix ccf description
ea457da
@rcpeene
Remove warnings from basics files
391ca46
@rcpeene
remove warnings in visualization nbs
dbf369c
@sjara
Minor fixes removing repeated requirements and imports.
043b65f
@sjara
Merge pull request #387 from sjara/jaramillo
d4d41c1 
Minor fixes removing repeated requirements and imports.
@rcpeene
Merge pull request #385 from AllenInstitute/jaramillo
bacff71 
Jaramillo
@rcpeene
Remove warnings from notebooks
a475903
@rcpeene
remove warnings from projects
28fd822
@rcpeene
remove warnings from embargoed
5c8c3bf
@rcpeene
remove warnings for higher-order notebooks
7ef1e4d
@rcpeene
Merge branch 'dev' of https://github.com/AllenInstitute/openscope_dat…
a428875 
…abook into dev
@rcpeene
remove warnings
77362b1
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@rcpeene rcpeene merged commit e2b4c3f into main May 24, 2024
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4 participants
@rcpeene @sjara @stephprince @colleenjg