Skip to content

Commit

Permalink
adjust warning on neuropixels nb
Browse files Browse the repository at this point in the history
  • Loading branch information
rcpeene committed Jun 21, 2024
1 parent 27cb731 commit a4c5c82
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion docs/visualization/visualize_neuropixels_probes.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@
"metadata": {},
"source": [
"# Visualizing Neuropixels Probe Locations\n",
"**Note: This notebook currently does not work on Google Colab, considering running it on [Dandihub](hub.dandiarchive.org/)**\n",
"**Note: This notebook currently does not work on Google Colab, or Dandihub. Please try running it locally**\n",
"\n",
"It can be handy to know the location and trajectory of the probes that obtain the data. Some NWB files have an **electrodes** field which stores these locations. To be more precise, they contain arrays of *CCF* coordinates. [CCF](https://community.brain-map.org/t/allen-mouse-ccf-accessing-and-using-related-data-and-tools/359) is a framework which represents locations in the brain with coordinates that are relative to predefined brain structures in a model brain. This notebook uses CCF coordinate data in an extracellular electrophysiology NWB file to render the locations of the [Neuropixels](https://www.neuropixels.org/probe) probes that were used.\n",
"\n",
Expand Down

0 comments on commit a4c5c82

Please sign in to comment.