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ENH: Make pcasl available in get_ants_data #465

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merged 1 commit into from
May 18, 2023
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ENH: Make pcasl available in get_ants_data #465

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22 changes: 14 additions & 8 deletions ants/utils/get_ants_data.py
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Original file line number Diff line number Diff line change
Expand Up @@ -29,6 +29,7 @@ def get_data(file_id=None, target_file_name=None, antsx_cache_directory=None):
- 'ch2'
- 'mni'
- 'surf'
- 'pcasl'
Returns
-------
string
Expand All @@ -50,7 +51,8 @@ def switch_data(argument):
"r85": "https://ndownloader.figshare.com/files/28726527",
"ch2": "https://ndownloader.figshare.com/files/28726494",
"mni": "https://ndownloader.figshare.com/files/28726500",
"surf": "https://ndownloader.figshare.com/files/28726530"
"surf": "https://ndownloader.figshare.com/files/28726530",
"pcasl": "http://files.figshare.com/1862041/101_pcasl.nii.gz",
}
return(switcher.get(argument, "Invalid argument."))

Expand All @@ -69,7 +71,8 @@ def switch_data(argument):
"r85",
"ch2",
"mni",
"surf"
"surf",
"pcasl",
"show")

if file_id == "show" or file_id is None:
Expand All @@ -78,13 +81,16 @@ def switch_data(argument):
url = switch_data(file_id)

if target_file_name == None:
extension = ".jpg"
if file_id == "ch2" or file_id == "mni" or file_id == "surf":
extension = ".nii.gz"
if extension == ".jpg":
target_file_name = antsx_cache_directory + file_id + "slice" + extension
if file_id == "pcasl":
target_file_name = antsx_cache_directory + "pcasl.nii.gz"
else:
target_file_name = antsx_cache_directory + file_id + extension
extension = ".jpg"
if file_id == "ch2" or file_id == "mni" or file_id == "surf":
extension = ".nii.gz"
if extension == ".jpg":
target_file_name = antsx_cache_directory + file_id + "slice" + extension
else:
target_file_name = antsx_cache_directory + file_id + extension

target_file_name_path = target_file_name
if target_file_name == None:
Expand Down