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v0.3.0
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@ACEnglish ACEnglish released this 11 Jun 20:06
· 143 commits to develop since this release
v0.3.0
705f05d

General improvements

  • ~8% speed increase from less work in the path-searching
  • Partial haplotypes bug fix increases accuracy
  • Fixed SQ and FT fields
  • Dedicated writing thread helps reduce memory usage by preventing a backlog of completed variants while reading
  • Default --out is stdout to allow easier compression/indexing (e.g. kanpig .. | bcftools sort -O z -o out.vcf.gz)
  • IUPAC codes are fixed by kanpig according to vcf specifications (Issue #1)
  • Fixed filtering of symbolic alts and BNDs
  • Argument validation

Full Changelog: v0.2.0...v0.3.0

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