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Old interval tree#23

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edawson wants to merge 7 commits intomastervgteam/vcflib:masterfrom old-interval-treevgteam/vcflib:old-interval-treeCopy head branch name to clipboard

+13-9

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Commits on Jun 11, 2019

• Revert to old intervaltree that predates a major refactor. This appears to fix the build process.

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  41ea182

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• Harden against int overflows by forcing SV fields to be int64_t or uint64_t rather than long

  edawson

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  71cf50a

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• Change CXXFLAGS to include debugging and c++11 rather than c++0x

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  e98378a

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• Use int64_t, rather than uint64_t, for SV span/len/end

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  7b14ba8

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Commits on Jun 13, 2019

• Add more warning texts for variant SV canonicalization

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  fb1a3e0

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• Check if a variant is canonicalizable before canonicalizing it

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  13f001d

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• Merge with remote

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